Simiduia agarivorans: M5M_19485
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Entry
M5M_19485 CDS
T02281
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
saga
Simiduia agarivorans
Pathway
saga00030
Pentose phosphate pathway
saga01100
Metabolic pathways
saga01120
Microbial metabolism in diverse environments
saga01200
Carbon metabolism
Module
saga_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
M5M_19485
Enzymes [BR:
saga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
M5M_19485
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Paralog
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AFV01020
UniProt:
K4KPB2
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Position
4284958..4286820
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AA seq
620 aa
AA seq
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MMNSNNKGQLNAVIARVTETIQQRSQKTRADYLALMRKQAEGGPSRKALPCGNLAHGFAA
CGQSDKDKLSATDVPNIAIVSSYNDMLSAHQPFEHTPAHIKKVIAELGGVAQFAGGVPAM
CDGITQGMAGMELSLFSRDVIAMSTAIALSHNMFDGALCLGVCDKIVPGLLIGALSFGHL
PMIFVPAGPMPSGLPNDEKARVRQLFAQGKVGREELLAAESASYHSPGTCTFYGTANSNQ
LVMEIMGLHLPGSSFVNPNTPLREALTGAAAEQVLRLTKAGNDYRPLAEVVDEKAIVNAV
VGLLATGGSTNHTMHLVAMAAAAGIQLTWDDFSELSSVVPSLTKIYPNGIADINHFQAAG
GMSFLIATLLDAGLLHADVLTVAAERGMQGYRQEPQIRDGKLQWVAGPERSLDTDVLRSV
DEPFSANGGLKVLKGNLGRGVIKVSAVKPEYRVQEGPAIVFHSQSEFIDAFQRGELDKDF
IAVLRYQGPRACGMPELHKLVPILGSLQDKGFKVGLVTDGRMSGASGKIAAAIHLTPEAA
AGGMISKIQNGDLIRLDGESGELNLLVDEAVLASRIVAQPDLSGNEAGCGRELFAAFRSQ
VTGAASGARSFGFAFAEEEA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatagcaacaataagggccagctcaatgcagtgattgcccgcgtcacagaaacc
attcaacagcgcagtcagaaaacccgtgcggattatctggccctgatgcgcaaacaagcc
gagggtggcccgtcccgtaaagcgctgccctgcggcaacctggcgcatggttttgccgct
tgtggccagtcggataaagacaagctgtccgccacggatgtgcccaacattgccatcgtg
tcttcctacaatgacatgttgtctgcacaccagccgttcgaacacacaccggcacacatc
aagaaagtcattgccgagctgggtggtgttgcccaattcgccggtggtgtgcctgcaatg
tgtgatggaattacccagggcatggcgggcatggaactgtcgctgttttcccgcgatgtg
attgccatgtctaccgcgattgcgctgtcgcacaatatgtttgatggcgccttgtgcctt
ggcgtatgcgataagatcgtgccgggtctgctgataggggctttgtcattcggccatctg
cccatgatttttgtgccggccggtcctatgccgtccggtttacctaacgacgaaaaagcc
cgcgtgcgccagttgtttgctcagggcaaagtcgggcgtgaggagctgttggcggcagag
tctgccagttatcattcacccgggacctgtactttctatggaacggccaactccaatcag
ttggtgatggaaatcatgggcctgcatttgcccggcagctcttttgtcaatcccaatacc
cctttacgcgaagccttgaccggtgcagcggcggaacaagtgttgcgcctgaccaaagcc
ggcaatgactatcgtccgttggctgaggtggtggatgaaaaagccatcgtcaatgccgtg
gtgggtttgctggccaccggtggctcaaccaaccacaccatgcacctggtcgccatggcg
gccgcggcagggattcagctgacctgggacgatttctccgaattgtcttcggtggtgccg
tcgctgaccaaaatttatcccaatggcattgccgatattaaccatttccaggcggcaggc
ggcatgtccttcctgattgccaccttgctggatgccggcttgttgcacgcggacgttctg
accgtcgcggctgagcgcggtatgcagggctatcgtcaggaaccgcagatccgcgacgga
aaattgcagtgggtggcagggccggagcgctcgctggataccgacgtgctgcgttctgtg
gacgagcccttcagcgccaatggcggcctgaaagtactgaaaggtaacctgggacgcggt
gtgatcaaggtgtccgcggttaaaccggaataccgcgtgcaggaagggcctgccatcgta
ttccacagccagtctgaatttatcgatgcgttccagcgcggcgagctggataaagatttt
attgctgtgcttcgctatcagggcccgcgcgcgtgcggcatgccggaactgcataagctg
gtgcccattctgggcagcctgcaagacaagggcttcaaagtcggtttggttaccgatggg
cgcatgagtggcgcgtccggcaaaattgccgcggcgattcatctgaccccggaagcggcc
gcaggtggcatgatcagcaaaatccagaacggcgacctgattcgcctcgacggcgagtcg
ggcgaattgaatctgctggtcgatgaagcggtattggccagccggatcgttgcacaaccg
gacctttccggtaacgaagccggctgtgggcgtgaattatttgcggcgttccggtcgcag
gtgaccggcgctgccagcggtgccagaagtttcggctttgcgttcgcggaggaagaggca
tga
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