Streptococcus agalactiae 138spar: DN94_00355
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Entry
DN94_00355 CDS
T03383
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sagc
Streptococcus agalactiae 138spar
Brite
KEGG Orthology (KO) [BR:
sagc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagc03019
]
DN94_00355
03009 Ribosome biogenesis [BR:
sagc03009
]
DN94_00355
Enzymes [BR:
sagc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DN94_00355
Messenger RNA biogenesis [BR:
sagc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DN94_00355
Ribosome biogenesis [BR:
sagc03009
]
Prokaryotic type
rRNA helicases
DN94_00355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AHX74273
LinkDB
All DBs
Position
58443..59786
Genome browser
AA seq
447 aa
AA seq
DB search
MSFKDFNFKPYIQRALDELKFVDPTDVQAKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF
EKLDESSDDVQVVITAPSRELATQIYQATKQIAEHSEQEVRVVNYVGGTDKLRQIEKLKV
SQPHIVIGTPGRIYDLVKSGDLAIHKAHTFVVDEADMTLDMGFLDTVDKIAGSLPKDVQI
LVFSATIPQKLQPFLKKYLTNPVMEKIKTATVIADTIDNWLLSTKGRDKNAQILELSKLM
QPYLAMIFVNTKERADELHSYLSSNGLKVAKIHGGIAPRERKRIMNQVKNLEFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKL
GINFIPKVIKNGEFQDTYDRDRRNNREKSYQKLDTEMIGLVKKKKKKIKPGYKKKIQWKV
DEKRRKERRASNRAKGRAERKAKKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattttaattttaaaccatacattcagagggctcttgatgagttaaaa
ttcgtcgatccaactgatgttcaagctaaattgattccagttgttcgttcaggccgcgat
cttgtgggggaatcgaaaactggttctggtaaaacccacacctttttacttcctattttt
gagaagctagatgaaagtagtgatgatgttcaagttgttattactgcaccaagtagagag
ttggcaacacaaatttatcaggcaactaaacaaattgctgagcattcagagcaagaagta
cgggtggttaactatgttggtggtactgacaaattacgtcaaattgaaaagttgaaagta
agccaacctcatattgtcattggaaccccaggacgtatttatgatttggtgaagtcaggt
gatttagctattcataaggcgcatacttttgttgttgatgaagcagatatgactctagat
atgggattccttgataccgttgataagattgcagggtctttacccaaggatgtccaaatt
ttagtcttttcagcaacgattccacaaaaattacagccatttttaaagaaatatttgacc
aatcctgtaatggaaaaaatcaaaacagcaacagttatcgctgataccatcgataactgg
cttttgtccactaaaggacgtgataaaaatgcacaaattttggaactctctaaactaatg
cagccctatcttgcaatgatatttgttaatacgaaagagcgtgcagacgaattacactcg
tacctttctagtaatggcttaaaagtagctaaaattcatggtgggattgcacctcgtgaa
cgtaaacgtattatgaatcaggttaaaaacctcgaatttgaatatattgttgcaacagat
ttagcagcgcgtggtattgatattgaaggtgttagccatgttatcaatgatgccatccct
caagacctatctttctttgtccaccgtgtcggtcgcacaggtcgcaatggcttatctggt
actgctataactttatatcagccaagtgacgattctgatattcgtgaacttgaaaaacta
ggtattaattttattcctaaagtcattaaaaacggtgaatttcaagatacatacgaccgt
gatcgtcgtaataaccgtgaaaagtcctatcaaaaattagatacagaaatgattggactt
gtgaaaaagaaaaagaaaaaaataaaaccaggttacaagaaaaaaattcaatggaaagtt
gatgaaaagcgtcgcaaagagcgtagagcaagtaatcgtgctaaggggcgtgcggagcgc
aaagctaaaaaacaaagtttttaa
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