Streptococcus agalactiae 138spar: DN94_03665
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Entry
DN94_03665 CDS
T03383
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sagc
Streptococcus agalactiae 138spar
Pathway
sagc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DN94_03665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagc03019
]
DN94_03665
03009 Ribosome biogenesis [BR:
sagc03009
]
DN94_03665
Enzymes [BR:
sagc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DN94_03665
Messenger RNA biogenesis [BR:
sagc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DN94_03665
Ribosome biogenesis [BR:
sagc03009
]
Prokaryotic type
rRNA helicases
DN94_03665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHX74811
LinkDB
All DBs
Position
685597..687147
Genome browser
AA seq
516 aa
AA seq
DB search
MKFTELNLSQDILSAVEKSGFVEPSPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIHTEDNTIQALIIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HVVVGTPGRLLDLIKRKALKLNHIETLILDEADEMLNMGFLENIEAIISRVPEARQTLLF
SATMPDPIKRIGVKFMKDPEHVKIKATELTNVNVDQYYVRVKENEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDHIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYIHRIGRTGRAGKSGQSITFVSPNEMGYLTIIENLTKK
RMTGMKPATASEAFQAKKKVALKRIARDFEDQELVSKFDKFKADALELATQYTPEELALY
VLSLTVQDPESLPEVEITREKPLPFKPSGGGFKGKGGRGNGRGGDRRRNDRGDRRDFKRR
DDKFKKDNRRQENKKPHKNTSSEKQTGFVIRNKGDK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaacttaacttatcgcaagatattctttcagcggtagaaaaatcaggc
tttgtagagccatcaccaatccaagaaatgactatcccacttgctcttgaaggcaaagat
gtcattggtcaagcgcagacaggtacaggaaaaactgcagcttttgggttaccaacttta
aataaaattcatactgaagataatactattcaagcacttattattgctcctacacgtgaa
cttgcagtacaatcacaagaagaattgttccgttttggacgcgataaaggtgttaaggtc
cgctctgtttatggtgggtcaagtattgaaaaacaaatcaaggcattacgttcaggagca
cacgttgttgttggaactccaggtcgcttacttgatttaattaaacgtaaagcacttaaa
cttaatcacattgaaactcttattcttgatgaagcagacgaaatgcttaacatgggattt
ttagagaacattgaagcaatcattagtcgtgtaccagaagcacgtcaaactcttttattt
tcagcgacaatgcctgatccaatcaaacgtatcggggttaaattcatgaaagatcctgag
catgttaaaattaaagcaactgaattaactaatgtgaatgttgatcagtattatgttcgt
gttaaggaaaatgaaaaattcgatactatgacacgtttgatggacgttgatcaaccagaa
ttgtcaattgtctttggacgtacgaaacgtcgtgtagatgaattaactcgtggtctaaaa
ttacgtggtttccgagcagaaggaattcatggagacttagatcaaaataaacgtcttcgt
gttatcagagattttaaaaatgaccatattgatattcttgttgccacagatgttgctgcg
cgtggtttagatatttcaggcgttacacatgtttacaactatgatattccccaagatcca
gaaagttatattcaccgtattggacgtactggtcgtgctggtaaatctggtcaatctatc
acttttgtttcaccaaacgaaatgggatatttgacaattattgaaaacttaactaaaaaa
cgtatgactggaatgaagcctgctactgcaagcgaagcatttcaggctaagaaaaaagtt
gcattgaaacgtattgcacgtgattttgaggatcaagaattagtttctaaatttgataaa
tttaaagccgatgctttggaattagcaactcaatacacaccagaagaacttgctctttat
gtcttaagcttaacagttcaggatccagaatctttaccagaggttgaaatcacacgtgaa
aaaccattaccatttaaaccatcaggtggtggctttaaaggtaaaggtggacgaggtaat
ggccgtggtggcgatcgtcgacgcaatgatcgtggtgatcgtcgtgattttaaacgtcgt
gatgataagttcaagaaagataatcgtcgtcaagaaaataaaaaacctcataaaaacact
tcaagtgaaaaacaaactggatttgttattcgcaacaaaggcgataaataa
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