Streptococcus agalactiae 138spar: DN94_07895
Help
Entry
DN94_07895 CDS
T03383
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sagc
Streptococcus agalactiae 138spar
Pathway
sagc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DN94_07895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagc03019
]
DN94_07895
Messenger RNA biogenesis [BR:
sagc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DN94_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AHX75562
LinkDB
All DBs
Position
1533604..1535283
Genome browser
AA seq
559 aa
AA seq
DB search
MSNINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVENIDRIKALVITHGHEDHIGGIPFLLKQANLPIYAGPLALALIKGKLEEHGLLRDAT
LYEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVGEPADL
HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGIEGRIIFASFASNIFRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG
KINNIHTSGHGGQQEQKLMLHLIKPKYFMPVHGEYRMQKVHAGLAVDTGIPKENIFIMEN
GDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLTVATVDFDSK
MILAGPDILSRGFIYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRPFL
YEKTEREPIIIPMVLTPDK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatcaacttaaaacccgaagaagttggggtttatgcgattggtggtctcggt
gaaatcggaaaaaatacttacggtatcgaatatcaagacgaaattattattgtagacgct
ggtattaaattccctgaagatgatcttttgggaatagattatgttatcccagactattca
tatatcgttgaaaacattgaccgtatcaaggcccttgttataactcatgggcatgaggac
cacatcggtggtattccttttctattaaaacaagctaatttaccgatttatgcaggccct
ctcgctcttgctctaatcaaaggtaagttagaagaacatggtttacttcgtgacgctaca
ttatacgaaatccacgctaatacagagctgacttttaaaaacttaagcgttacatttttc
cgcactactcactccattcctgaaccattaggtattgttattcatacccctcaaggtaag
gttatttgtacaggtgacttcaaatttgactttacacctgttggggagccagctgactta
catcgtatggctgctctaggtgaagatggtgtcctctgccttttatcagactcgacaaat
gctgaagttccaaccttcactaattccgaaaaaattgttgggcaatctattatgaagatt
atcgaaggtatcgagggacgtattattttcgcctcttttgcttcaaacatcttccgactc
caacaggctgctgaagctgctgttaaaactggtcgtaaaattgctgtttttggacggtca
atggaaaaggcaattgttaacggtattgaacttggctatattaaagttccaaaaggtacc
ttcattgagccaagcgaacttaaaaatcttcatgctagtgaagttttaattatgtgtaca
ggtagtcaaggtgagtctatggcagcacttgctcgtatcgctaatggtactcatcgtcaa
gttactttgcagcctggtgatactgtgattttctcatcaagcccaatccctggtaataca
acaagtgtcaataaattaatcaataccattcaagaagctggtgtcgatgttattcatggt
aaaattaacaatatccatacctccggccatggtggtcaacaagaacaaaaattaatgtta
cacttgattaaaccaaagtatttcatgcccgtacacggtgagtatcgcatgcaaaaagtc
catgctggtttagcagttgacacaggtattcctaaagagaatatcttcattatggaaaac
ggtgatgttttagctttaacgagcgactctgctcgcattgctggacatttcaatgctcaa
gatatctacgttgatgggaatggtattggcgatattggtgcggcagttctacgtgaccgc
cacgacttatctgaagatggtgttgtccttaccgttgctaccgttgatttcgattcaaaa
atgattttagctggaccagacatccttagccgaggctttatctatatgagagaatctggg
gaccttattcgcgaaagccaacatatcttattcaatgctattcgtattgcactgaaaaat
aaagatgcaagtatccaatcagtaaatggagctattgttaatgccttacgcccattctta
tatgaaaaaactgagcgtgagcctatcattattcctatggtccttacccctgataaataa
DBGET
integrated database retrieval system
