Streptococcus agalactiae NGBS061: EN72_04625
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Entry
EN72_04625 CDS
T03516
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sage
Streptococcus agalactiae NGBS061
Pathway
sage03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sage00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EN72_04625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sage03019
]
EN72_04625
03009 Ribosome biogenesis [BR:
sage03009
]
EN72_04625
Enzymes [BR:
sage01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EN72_04625
Messenger RNA biogenesis [BR:
sage03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EN72_04625
Ribosome biogenesis [BR:
sage03009
]
Prokaryotic type
rRNA helicases
EN72_04625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIF86365
UniProt:
A0A0E1EGM9
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All DBs
Position
839574..841160
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AA seq
528 aa
AA seq
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MKFTELNLSQDILSAVEKAGFVEPSPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIHTEDNTIQALIIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HVVVGTPGRLLDLIKRKALKLNHIETLILDEADEMLNMGFLEDIEAIISRVPETRQTLLF
SATMPDPIKRIGVKFMKDPEHVKIKATELTNVNVDQYYVRVKENEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDHIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVSPNEMGYLTIIENLTKK
RMTGMKPATASEAFQAKKKVALKRIARDFEDQELVSKFDKFKADALELATQYTPEELALY
VLSLTVQDPESLPEVEITREKPLPFKPSGGGFKGKGGRGNGRGGDRRRNDRGDRRGNRDR
DDRGGRCDFKRRDDKFKKDNRRQENKKPHKNTSSEKQTGFVIRNKGDK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaacttaacttatcgcaagatattctttcagcggtagaaaaagcaggc
tttgtagagccatcaccaatccaagaaatgactatcccacttgctcttgaaggcaaagat
gtcattggtcaagcgcagacaggtacaggaaaaactgcagcttttgggttaccaacttta
aataaaattcatactgaagataatactatccaagcacttattattgctcctacacgtgaa
cttgcagtacaatcacaagaagaattgttccgttttggacgcgataaaggtgttaaggtc
cgctctgtttatggtgggtcaagtattgaaaaacaaatcaaggcattacgttcaggagca
cacgttgttgttggaactccaggtcgattacttgatttaattaaacgtaaagcacttaaa
cttaatcacattgaaactcttattcttgatgaagcagacgaaatgcttaacatgggattt
ttagaggacattgaagcaatcattagtcgtgtaccagaaacacgtcaaactcttttattc
tcagcgacaatgcctgatccaatcaaacgtatcggcgttaaattcatgaaagatcctgag
catgttaaaattaaagcaactgaattaactaatgtgaatgttgatcagtattatgttcgt
gttaaggaaaatgaaaaattcgatactatgacacgtttgatggacgttgatcaaccagaa
ttgtcaattgtctttggacgtacgaaacgtcgtgtagatgaattaactcgtggactaaaa
ttacgtggtttccgagcagaaggaattcatggagacttagatcaaaataaacgtcttcgt
gttatcagagactttaaaaatgaccatattgatattcttgttgccacagatgttgctgcg
cgtggtttagatatttcaggcgttacacatgtttacaactatgatattccccaagatccc
gaaagttatgttcaccgtattggacgtactggtcgtgctggtaaatctggtcaatctatc
acttttgtttcaccaaacgaaatgggatatttgacaattattgaaaacttaactaaaaaa
cgtatgactggaatgaagcctgctactgcaagcgaagcatttcaggctaagaaaaaagtt
gcattgaaacgtattgcacgtgactttgaggatcaggaattagtttctaaatttgataaa
tttaaagccgatgctttagaattagcaactcaatacacaccagaagaacttgctctttat
gtcttaagcttaacagttcaggatccagaatcgttaccagaagttgaaatcacacgtgaa
aaaccattaccatttaaaccatcaggtggtggctttaaaggtaaaggtggacgaggcaat
ggccgtggtggcgatcgtcgacgcaatgatcgtggtgatcgtcgtggaaatcgtgaccgt
gatgatcgtggtggtcgttgtgattttaaacgtcgtgatgataagttcaagaaagataat
cgtcgtcaagaaaataaaaaacctcataaaaacacttcaagtgaaaaacaaactggattt
gttattcgcaacaaaggcgataaataa
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