Streptococcus agalactiae NGBS061: EN72_09555
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Entry
EN72_09555 CDS
T03516
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sage
Streptococcus agalactiae NGBS061
Pathway
sage03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sage00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EN72_09555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sage03019
]
EN72_09555
Messenger RNA biogenesis [BR:
sage03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EN72_09555
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AIF87315
UniProt:
A0A0E1EJB4
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All DBs
Position
1846597..1848276
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AA seq
559 aa
AA seq
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MSNINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVENIDRIKALVITHGHEDHIGGIPFLLKQANLPIYAGPLALALIKGKLEEHGLLRDAT
LYEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVGEPADL
HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGIEGRIIFASFASNIFRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKHLHASEVLIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG
KINNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGIPKENIFIMEN
GDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDSK
MILAGPDILSRGFIYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRPFL
YEKTEREPIIIPMVLTPDK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatcaacttaaaacccgaagaagttggggtttatgcgattggtggtctcggt
gaaatcggaaaaaatacttacggtatcgaatatcaagacgaaattattattgtagacgct
ggtattaaattccctgaagatgatcttttgggaatagattatgttatcccagactattca
tatatcgttgaaaacattgaccgtatcaaggcccttgttataactcatgggcacgaggac
cacatcggtggtattccttttctattaaaacaagctaatttaccgatttatgcaggccct
ctcgctcttgctctaatcaaaggtaagttagaagaacatggtttacttcgtgacgctaca
ttatacgaaatccacgctaatacagagctgacttttaaaaacttaagcgttacatttttc
cgcactactcactccattcctgaaccattaggtattgttattcatacccctcaaggtaag
gttatttgtacaggtgacttcaaatttgactttacacctgttggggagcccgctgactta
catcgtatggctgctctaggtgaagacggtgtcctctgccttttatcagactcaacaaat
gctgaagttccaaccttcactaattccgaaaaaattgttgggcaatctattatgaagatt
atcgaaggtatcgagggacgtattattttcgcctcttttgcttcaaacatcttccgactc
caacaggctgctgaagctgctgttaaaactggtcgtaaaattgctgtttttggacggtca
atggaaaaggcaattgttaacggtattgaacttggctatattaaagttccaaaaggtacc
ttcattgagccaagcgaacttaaacatcttcatgctagtgaagttttaattatgtgtaca
ggtagtcaaggtgagtctatggcagcacttgctcgtatcgctaacggtactcatcgtcaa
gttactttgcaacctggtgatactgtgattttctcatcaagcccaatccctggtaataca
acaagtgtcaataaattaatcaataccattcaagaagctggtgtcgatgttattcatggt
aaaattaacaatatccatacctccggccatggtggtcaacaagaacaaaaattaatgtta
cgcttgattaaaccaaagtatttcatgcccgtacacggtgagtatcgcatgcaaaaagtc
catgctggtttagcagttgacacaggtattcctaaagagaatatcttcattatggaaaac
ggtgatgttttagctttaacgagcgactctgctcgcattgctggacatttcaatgctcaa
gatatctacgttgatgggaatggtattggcgatattggtgcggcagttctacgtgaccgc
cacgacttatctgaagatggtgttgtccttgccgttgctaccgttgatttcgattcaaaa
atgattttagctggaccagacatccttagccgaggctttatctatatgagagaatctggg
gaccttattcgcgaaagccaacatatcttattcaatgctattcgtattgcactgaaaaat
aaagatgcaagtatccaatcagtaaatggagctattgttaatgccttacgaccattctta
tatgaaaaaactgagcgtgagcctatcattattcctatggtccttacccctgataaataa
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