KEGG   Streptococcus agalactiae NGBS061: EN72_09555
Entry
EN72_09555        CDS       T03516                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sage  Streptococcus agalactiae NGBS061
Pathway
sage03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sage00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EN72_09555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sage03019]
    EN72_09555
Messenger RNA biogenesis [BR:sage03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EN72_09555
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 SIS_2
Other DBs
NCBI-ProteinID: AIF87315
UniProt: A0A0E1EJB4
LinkDB
Position
1846597..1848276
AA seq 559 aa
MSNINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVENIDRIKALVITHGHEDHIGGIPFLLKQANLPIYAGPLALALIKGKLEEHGLLRDAT
LYEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVGEPADL
HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGIEGRIIFASFASNIFRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKHLHASEVLIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG
KINNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGIPKENIFIMEN
GDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDSK
MILAGPDILSRGFIYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRPFL
YEKTEREPIIIPMVLTPDK
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgtcaaatatcaacttaaaacccgaagaagttggggtttatgcgattggtggtctcggt
gaaatcggaaaaaatacttacggtatcgaatatcaagacgaaattattattgtagacgct
ggtattaaattccctgaagatgatcttttgggaatagattatgttatcccagactattca
tatatcgttgaaaacattgaccgtatcaaggcccttgttataactcatgggcacgaggac
cacatcggtggtattccttttctattaaaacaagctaatttaccgatttatgcaggccct
ctcgctcttgctctaatcaaaggtaagttagaagaacatggtttacttcgtgacgctaca
ttatacgaaatccacgctaatacagagctgacttttaaaaacttaagcgttacatttttc
cgcactactcactccattcctgaaccattaggtattgttattcatacccctcaaggtaag
gttatttgtacaggtgacttcaaatttgactttacacctgttggggagcccgctgactta
catcgtatggctgctctaggtgaagacggtgtcctctgccttttatcagactcaacaaat
gctgaagttccaaccttcactaattccgaaaaaattgttgggcaatctattatgaagatt
atcgaaggtatcgagggacgtattattttcgcctcttttgcttcaaacatcttccgactc
caacaggctgctgaagctgctgttaaaactggtcgtaaaattgctgtttttggacggtca
atggaaaaggcaattgttaacggtattgaacttggctatattaaagttccaaaaggtacc
ttcattgagccaagcgaacttaaacatcttcatgctagtgaagttttaattatgtgtaca
ggtagtcaaggtgagtctatggcagcacttgctcgtatcgctaacggtactcatcgtcaa
gttactttgcaacctggtgatactgtgattttctcatcaagcccaatccctggtaataca
acaagtgtcaataaattaatcaataccattcaagaagctggtgtcgatgttattcatggt
aaaattaacaatatccatacctccggccatggtggtcaacaagaacaaaaattaatgtta
cgcttgattaaaccaaagtatttcatgcccgtacacggtgagtatcgcatgcaaaaagtc
catgctggtttagcagttgacacaggtattcctaaagagaatatcttcattatggaaaac
ggtgatgttttagctttaacgagcgactctgctcgcattgctggacatttcaatgctcaa
gatatctacgttgatgggaatggtattggcgatattggtgcggcagttctacgtgaccgc
cacgacttatctgaagatggtgttgtccttgccgttgctaccgttgatttcgattcaaaa
atgattttagctggaccagacatccttagccgaggctttatctatatgagagaatctggg
gaccttattcgcgaaagccaacatatcttattcaatgctattcgtattgcactgaaaaat
aaagatgcaagtatccaatcagtaaatggagctattgttaatgccttacgaccattctta
tatgaaaaaactgagcgtgagcctatcattattcctatggtccttacccctgataaataa

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