Streptococcus agalactiae 2-22 (serotype Ib): GBS222_1494
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Entry
GBS222_1494 CDS
T02656
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sagl
Streptococcus agalactiae 2-22 (serotype Ib)
Brite
KEGG Orthology (KO) [BR:
sagl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagl03019
]
GBS222_1494
Messenger RNA biogenesis [BR:
sagl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GBS222_1494
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
UPF0154
tRNA_anti_2
PaaX
Motif
Other DBs
NCBI-ProteinID:
CCO75164
UniProt:
R4ZAB3
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All DBs
Position
complement(1547282..1548223)
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AA seq
313 aa
AA seq
DB search
MKINQMKKDELFEGFYLIKKAEVRKTRAGKDFIAFTFQDDTGEISGNMWDAQTYNVEEFV
AGKIVHMKGRREVYNGTPQVNQITLRNIKDGEPNDPRDFKEKPPINVDNVREYMEQMLFK
IENATWQRVVRALYRKYNKEFFTYPAAKTNHHAFESGLAYHTATMVRLADSIGDIYPELN
KSLMFAGIMLHDLAKVIELSGPDNTEYTIRGNLIGHISLIDEELTKILAELNIDDTKEEV
TVLRHVILSHHGQLEYGSPVRPRIMEAEIIHMIDNIDANMMMMTTALNRVNEGEMTNRIF
AMDNRSFYKPNIK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaccaaatgaaaaaagacgagctttttgaggggttttaccttataaagaaa
gcagaagttcgtaaaacgcgtgcaggtaaagactttattgcctttacctttcaagatgat
actggcgaaatttcaggaaatatgtgggatgcacaaacctataatgtagaagagtttgta
gccggtaaaattgttcatatgaaagggcgtcgtgaagtttataatggaactccccaagtc
aaccaaattacattaagaaacatcaaagatggtgaacctaatgatcctagagattttaaa
gaaaaacctccaatcaatgttgacaacgtgagagagtacatggaacaaatgctctttaaa
attgaaaatgcaacctggcagcgtgtggtaagagcactttatcgtaaatacaataaggaa
ttttttacctatccagccgccaaaacaaaccaccacgcctttgaatcaggattggcatat
cacacggcaacgatggttcgtttggcagatagtattggagatatctatccagaacttaat
aaaagtttgatgtttgctggtattatgctacatgatttagccaaggtcattgagttatcg
ggtcctgataatacagaatatactattcgaggtaatcttatcggtcatatttcacttatt
gatgaggaattaacaaaaatactagcagagcttaatattgatgatacaaaagaagaggtt
acagtgttacgccatgttattctgagtcatcatggacaattagaatatggaagcccggtt
cgtcctagaatcatggaggcagaaattatccatatgatcgataatattgatgcaaatatg
atgatgatgacaacagctttaaaccgtgtcaacgaaggtgaaatgacaaatcgcattttt
gccatggataaccgttctttttataaaccgaacattaaataa
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