Streptococcus agalactiae 09mas018883: BSA_12860
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Entry
BSA_12860 CDS
T02703
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sagm
Streptococcus agalactiae 09mas018883
Pathway
sagm03410
Base excision repair
sagm03430
Mismatch repair
sagm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sagm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSA_12860
03430 Mismatch repair
BSA_12860
03440 Homologous recombination
BSA_12860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagm03400
]
BSA_12860
DNA repair and recombination proteins [BR:
sagm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BSA_12860
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BSA_12860
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BSA_12860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
CCW38055
LinkDB
All DBs
Position
complement(1243151..1245349)
Genome browser
AA seq
732 aa
AA seq
DB search
MISAKYSWVLNNQKPDAGFFEASKKEKISEAVASLIYSRGIKTSAELHHFLQTNLENLHD
PYLLNDMDKAVNRIRRAIENNETILVYGDYDADGMTSASIMKEALDMMGAEVQVYLPNRF
TDGYGPNESVYKYFIEQQDVSLIITVDNGVAGHEAIAYAQNQGVDVVVTDHHSMPADLPC
AYAIIHPEHPDANYPFPYLAGCGVAFKVACALLETIPTEMLDLVAIGTIADMVSLTDENR
IMVKAGLEVMKDSERIGLQELISLSNIDLKTLNEETIGFKIAPQLNALGRLDDPNPAIEL
LTGFDDEESQAIAQMIDQKNEERKEIVQTIFDQAMQMLDQTKPVQVLAKENWHPGVLGIV
AGRILERTGQPVIVLNIEDGIAKGSARSVEALDIFQAFDQHRELFIAFGGHSGAAGMTLE
ESKVGDLSQVLCDYISKKQLDMSQKKTLTIDSELRFDELSLDTVRDFEKLAPFGMDNKKP
VFLLKDFKVSQARVMGQNSAHLKLKLEQDGQALDLVAFNMGSQLQEFQQAQHLELAVTLS
VNQWNGATTLQLMLEDARVDGIQLFDIRSKASSLPHGVPILSQEEQSKEVILLTVPDHPQ
ELKQMTQGKQFDAIYFKNEIPKNYFISGYGTRDQFASLYKTIYQFPEFDVRYKLKELSSY
LHIPDILLIKMIQIFEELHFVTITEGIMTVNKEAEKRDISESQIYQELKETVKFQELMAL
GTPKEIYDFMMS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatatctgctaagtatagttgggtcctcaataaccaaaagccagacgctggctttttt
gaggcttcaaaaaaagaaaagataagtgaagcggtggcttccttaatttattcgcgaggt
attaagacatcagcggaattacatcattttttacaaactaatttggaaaatctccatgat
ccttatttgttaaatgatatggataaagctgttaatcgtattagacgagctattgaaaat
aatgaaactattttagtttatggagactatgatgctgatggaatgacatcagcatcaatc
atgaaagaagctttagatatgatgggagctgaagtccaggtttatctcccaaatcgtttt
acagatggttacggtcccaatgaaagtgtttataaatattttattgaacaacaagatgtt
tcattaatcattacggttgataatggtgtggcagggcatgaagcaattgcatatgctcaa
aatcaaggtgtggacgtggtagttactgatcatcacagtatgccagcagatttaccttgt
gcttatgctattattcacccagaacatcctgatgctaattatccatttccttatttagca
gggtgtggtgttgcttttaaagtagcttgtgctctcttagaaacaatcccgacagaaatg
ttggatttggttgctattgggacgattgcagatatggttagcctaactgatgaaaatcgt
atcatggtaaaagctggacttgaagttatgaaagatagtgaaagaataggcttacaggag
ctaatatctttatcaaatattgatttaaaaacactaaatgaagaaactattggatttaaa
attgctccacaattaaacgctttaggaagactcgatgaccctaatccagctattgaatta
ctgacagggtttgatgatgaagaatctcaagcaatagcccaaatgattgatcaaaaaaat
gaagagcgcaaagaaatcgttcaaactatctttgaccaagctatgcaaatgcttgatcaa
acaaagcctgtacaagttttagcaaaagaaaattggcatccaggggttttaggtattgtg
gcgggtcgtattttagagagaactggacaacctgttattgttttgaatattgaagatggt
attgctaaaggaagtgccagaagtgtagaagcacttgatatttttcaagcttttgaccag
catcgagaattattcattgcttttggaggtcacagcggagcagcaggcatgactttagag
gaaagtaaggtgggtgatctttctcaagttttatgtgactatatctctaaaaaacaattg
gacatgagtcagaaaaaaactctgacaattgatagtgagctacgttttgacgaacttagt
ttagacactgttagagattttgaaaagttagcgccatttggaatggataataaaaagcca
gtctttttgttaaaagattttaaagtgagtcaagctagagtcatggggcaaaacagtgct
catctgaaattaaaactagaacaagatggacaagcacttgatttggtagcatttaatatg
gggagtcaactacaagagttccaacaagcacaacatttggagttagctgtcactttatct
gttaatcaatggaatggtgccacaaccctacaattaatgttggaggatgcgcgtgtagac
ggtattcaattatttgatattagaagcaaagcaagtagcttacctcatggagtgccaatc
ctatctcaagaagagcagagcaaagaagttattcttttgactgttcccgatcatccacaa
gaattaaaacaaatgactcaaggtaaacagtttgatgccatctattttaaaaatgagata
ccaaaaaattattttatatctggttatggtacacgtgatcagtttgctagtttatataaa
acaatatatcaattcccagaatttgacgttcgttataagttaaaagagctcagttcctac
cttcatatccctgatattttattaattaaaatgattcaaatttttgaagaactacatttt
gttacgattacagaagggattatgacagtcaataaagaagcagaaaagcgagatatctct
gagagtcaaatttatcaagaattaaaagagacagttaagtttcaagaattaatggcttta
gggacacctaaagaaatatatgattttatgatgagttga
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