Streptococcus agalactiae 09mas018883: BSA_15670
Help
Entry
BSA_15670 CDS
T02703
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sagm
Streptococcus agalactiae 09mas018883
Pathway
sagm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sagm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSA_15670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagm03400
]
BSA_15670
Enzymes [BR:
sagm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BSA_15670
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BSA_15670
DNA repair and recombination proteins [BR:
sagm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSA_15670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
KTSC
Motif
Other DBs
NCBI-ProteinID:
CCW38334
LinkDB
All DBs
Position
complement(1536542..1537363)
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVETVRKGLERLVVNQEIASITIKVPKMVKTDLNDFMISLPGKTIQQVLRRGKYL
LFDFGEMVMVSHLRMEGKYLLFPNKVPDNKHFHLYFKLTNGSTLVYQDVRKFGTFELVRK
SSLKDYFTQKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGLGNIYVDEVLW
AAKIHPQRLANQLTESETSLLHKEIIRILTLGIEKGGSTIRTYKNALGEDGTMQKYLQVY
GKTGQPCPRCGCLIKKIKVGGRGTHYCPRCQCL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtagaaaccgttagaaaaggactagaaagacttgtagttaat
caagaaatagcttctataacgattaaagtccctaaaatggtgaaaactgatttgaatgac
tttatgataagtctaccaggaaaaacaattcaacaggtattgagacgagggaagtatctt
ctttttgattttggtgaaatggttatggtatcacatttacgcatggaaggaaaatatcta
ctcttcccaaataaagtaccagataacaaacattttcacctttatttcaaattgactaat
ggcagcacattggtttaccaagatgtccgtaaatttgggacatttgagttggttcgtaaa
tcatctctcaaagattattttactcaaaaaaaattaggtcctgagccaactgctgacaca
tttcaatttgagcctttttcaaaaggcttagcaaactccaaaaagccaataaaaccttta
ctattagatcagagattagtagcaggacttggaaatatttacgtagatgaagtcttgtgg
gcagcaaaaattcacccacagcgtttggctaatcaattgaccgaatctgaaacaagctta
ttacacaaggaaattattcgcattttaactttaggcatcgaaaaaggtggctccacgatt
agaacatataagaatgctcttggagaggacggtacgatgcaaaagtatttacaggtctat
ggtaaaactgggcaaccgtgtccaaggtgtggttgtttaattaagaagataaaagtagga
gggagagggacgcattattgccctcggtgtcaatgcttatga
DBGET
integrated database retrieval system
