Streptococcus agalactiae 138P: V193_01885
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Entry
V193_01885 CDS
T03183
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sagp
Streptococcus agalactiae 138P
Pathway
sagp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sagp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
V193_01885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sagp03021
]
V193_01885
03400 DNA repair and recombination proteins [BR:
sagp03400
]
V193_01885
Enzymes [BR:
sagp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V193_01885
Transcription machinery [BR:
sagp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V193_01885
DNA repair and recombination proteins [BR:
sagp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V193_01885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AHN29969
LinkDB
All DBs
Position
333186..336836
Genome browser
AA seq
1216 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIICDRCGVEVTRAKDRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPMDTPLEPKSLLTEREYREKLQEYGYGSFVAKMGAEAIQDLL
KRVDLDAEIAVLKEELKSATGQKRVKAVRRLDVLDAFKKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDLAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMIFKDHDEAVMAYQNGYVHLHTRVGI
AVDSMPNKPWTEEQKHKIMVTTVGKILFNDIMPEDLPYLIEPNNANLTEKTPDKYFLEPG
QDIQAVIDNLEINIPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKAEIIDAAHHRVEDINKAFRRGLMTEEDRYVAVTTTWREAKEALEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLTITAITDGKEVTETL
EERLIGRYTKKSIKHPETGEILVGADTLITEDMAAKVVKAGVEEVTIRSVFTCNTRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGEVVAIEEDSSIRTKKVFVKGQTGEGEYVVPFTARMKVEVGDE
VARGAALTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTDLLPGTLMDISDFTDANKDIVISGGIPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPLAVNEVEIIEGT
PVDAEVTEVSTPTTED
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcatcaccaagtaaggtc
cgttcatggtcttatggtgaagttaaaaaacctgaaacaatcaactaccgcacattgaaa
ccagaacgtgaaggactttttgatgaagttatttttggtccaacaaaagattgggaatgt
gcgtgtggaaaatacaaacgtattcgttacaaaggaatcatttgtgaccgttgtggcgtt
gaagtaactcgtgcaaaagatcgtcgcgaacgtatgggacatatcgagttaaaagcacca
gtatctcatatctggtatttcaaaggtatcccatcgcgtatgggactcacattggatatg
agccctcgtgcacttgaagaagttatttattttgcggcttatgttgttatcgatccaatg
gacacaccattagaaccgaagtcactccttactgagcgtgaataccgtgaaaaacttcaa
gagtacggttacggttcgtttgttgctaaaatgggtgctgaagccattcaagatcttctt
aaacgcgttgatttagatgcagaaatcgcagttcttaaagaggagttgaaatcagcgaca
ggtcaaaaacgtgtgaaagcagttcgtcgtctggatgtgttagatgcctttaaaaaatct
ggaaataaaccagaatggatggttcttaacattttaccggttatcccaccggatcttcgt
ccgatggttcaattagatggtggtcgttttgcggcatcagacttgaatgacctttaccgc
cgtgttattaaccgtaacaaccgtttggcacgtttgttggaattaaatgctcctggcatc
atcgttcaaaatgaaaaacgtatgttacaagaagctgttgatgcgcttatcgacaatggt
cgtcgtggtcgtccaattaccggaccaggtagtcgtcctttgaaatcattaagccatatg
cttaaaggtaaacaaggtcgtttccgccaaaacttgcttggtaaacgtgttgacttctct
ggacgttccgttattgctgttggtccaacactcaaaatgtaccaatgtggtgtaccacgt
gaaatggctattgagctcttcaaaccttttgtaatgcgtgaaatcgttgctcgtgacctc
gcagggaacgttaaagcagctaaacgtatggttgaacgtggggacgaacgtatttgggac
atcttagaagaagttattaaagagcacccagtacttctaaaccgtgcacctactcttcac
agattaggtatccaagcgtttgaacctgtccttattgatggtaaggcgcttcgtcttcac
ccacttgtatgtgaggcctacaatgctgactttgatggagaccaaatggccatccacgtt
ccattgtctgaagaagcccaagcagaagctcgtcttttgatgcttgctgcagagcacatc
cttaaccctaaagatggtaagccagtcgtaacaccatctcaggacatggttttaggaaat
tactacctgactatggaagatgctggtcgtgaaggtgaaggcatgattttcaaagatcat
gacgaagcagttatggcatatcaaaatggttatgttcatttacatacacgtgttggtatc
gctgttgattcaatgccgaataagccttggacagaagagcaaaaacataaaatcatggtt
acaacagttggtaagattctcttcaacgatatcatgcctgaagatttaccgtacttaatt
gaacctaataatgcaaacttgacagaaaaaactccagataaatacttcttagagccaggt
caggatattcaagcagttattgataacttagagattaatattccctttaagaagaaaaat
cttggtaatattatcgcagaaacttttaaacgtttccgtacaacagaaacttctgctttc
cttgaccgtttgaaggaccttggatattatcattcaacacttgctggtttgactgtgggt
attgctgatatcccagttattgacaataaagctgagattattgatgcagctcaccacaga
gttgaagatatcaataaagccttccgtcgaggtttgatgactgaagaagatcgttatgtt
gctgttacaacaacatggcgtgaagctaaagaagcacttgaaaaacgtcttattgagaca
caagatccaaagaatcctatcgttatgatgatggactcaggagctcgtggtaacatctca
aacttctcacaacttgccggtatgcgtggtttgatggctgctcctaacggacgtatcatg
gaattgccaatcttatcaaacttccgtgaaggtcttagtgttttggaaatgttcttctca
actcacggtgcgcgtaaaggtatgactgatacggcccttaagacagccgactcaggctac
cttactcgtcgtttggttgacgttgcccaagatgttattattcgtgaagatgactgtgga
acagaccgcggtttgacaatcacagcaattacagatggtaaagaggttactgagacactt
gaagagcgtttgataggacgttatactaagaagtcaatcaaacatcctgagacaggtgaa
attcttgttggtgcggataccttaattactgaagatatggctgctaaagttgttaaagcc
ggcgttgaggaagtaactatccgatcagtatttacatgtaacactcgccatggtgtttgt
cgtcactgttacggtattaacttggcaacaggtgatgctgttgaggttggtgaagcagtt
ggtactattgcagctcaatctatcggtgaaccagggacacagcttacaatgcgtaccttc
cataccggtggtgttgcttcaaatactgatattacacaaggtcttccacgtatccaagaa
atctttgaagcacgtaaccctaaaggtgaggcagttattactgaagttaagggtgaagtc
gttgcaattgaagaagattcttcaatacgtactaagaaagtattcgttaaaggtcagaca
ggtgagggagaatacgttgttccatttacggcacgtatgaaagttgaagttggtgatgaa
gtagctcgtggtgcggccttaactgaagggtctatccaaccaaaacgtctccttgaagtt
cgtgatactttatctgttgaaacgtacctacttgctgaagtacaaaaagtttaccgtagc
caaggggtagaaatcggagataaacacgttgaggtaatggttcgtcaaatgctccgtaaa
gttcgtgtcatggatccaggagatacagatcttcttccaggtacacttatggatatttca
gactttacagatgctaacaaagatattgttatttctggtggaatccctgcgacaagccgt
cctgtccttatgggtattactaaggcttcccttgaaactaattcattcttatcagctgca
tccttccaagaaacaacacgtgttcttacagatgctgctatccgtggtaagaaagatcac
ttacttggtcttaaagaaaatgttattatcggtaaaatcattccagcgggtactggtatg
gctcgttaccgtaatattgaaccacttgctgttaatgaagttgagattattgaaggaact
cctgttgatgcagaagttacggaagtatcaacacctacaacagaagattaa
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