Streptococcus agalactiae 138P: V193_06350
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Entry
V193_06350 CDS
T03183
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sagp
Streptococcus agalactiae 138P
Pathway
sagp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sagp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V193_06350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sagp03021
]
V193_06350
Transcription machinery [BR:
sagp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V193_06350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DBD_HTH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AHN30738
LinkDB
All DBs
Position
complement(1225128..1226237)
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AA seq
369 aa
AA seq
DB search
MAEKKGNTTFNVQVADFIRNHKKQGTAIDDEVTEKLVIPFVLDADQIDDLLERLTDGGIS
ITDKEGNPSTKYVVEGPKPEELTDEELIGSNSAKVNDPVRMYLKEIGVVPLLTNEEEKEL
AVAVAEGDLMAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYLKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLKDFMED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaaaaggaaatacaacttttaatgttcaagtggcggattttattcgcaat
cataaaaaacaaggtactgcaattgatgatgaggtaacagaaaaacttgttattcctttt
gttttagatgcagatcaaattgatgatttgttagaacgattgacagacggtggaatttca
atcacagataaagaaggcaatccttcaacaaagtatgtggtagaagggccaaaacctgaa
gaattgactgatgaagagctcataggaagtaattctgctaaagtcaatgacccagtacgt
atgtacttgaaggaaattggtgttgttcctcttttaacgaatgaagaagaaaaagaattg
gctgttgcggttgccgaaggagatttaatggctaaacaacgtttagctgaagcaaacctt
cgtcttgttgtctcaattgcaaaacgttatgttggacgtggaatgcaatttcttgattta
attcaagagggtaacatgggactcatgaaagctgttgataaatttgattatttaaaggga
ttcaaattttcaacttatgcaacatggtggattcgtcaagctataacacgtgcaattgca
gatcaagcacgtacgattcgtattcctgttcatatggttgaaacgattaataaattggtc
cgtgaacaacgtaatcttcttcaagaacttggtcaagatccaactcctgagcaaatcgca
gaacgcatggatatgacaccagataaagtacgcgaaatcctaaaaattgctcaagagccg
gtatcgctagaaacgccaatcggtgaggaagatgatagccatttgggtgatttcattgaa
gacgaagttattgaaaatccagtagattatactacacgtgttgttcttcgtgagcaatta
gatgaggttttagatactcttactgaccgtgaagagaatgttcttcgtttacgctttggt
cttgacgatggtaaaatgcgtacgttagaggatgtaggtaaagtatttaatgttactcgt
gagcgcattcgtcagattgaagctaaagcccttagaaaacttcgccatcctagtcgtagc
aagcaacttaaagatttcatggaagattga
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integrated database retrieval system
