Streptococcus agalactiae 138P: V193_06660
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Entry
V193_06660 CDS
T03183
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sagp
Streptococcus agalactiae 138P
Pathway
sagp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sagp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V193_06660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagp03400
]
V193_06660
Enzymes [BR:
sagp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
V193_06660
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V193_06660
DNA repair and recombination proteins [BR:
sagp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V193_06660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AHN30787
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All DBs
Position
complement(1296560..1297381)
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AA seq
273 aa
AA seq
DB search
MPELPEVETVRKGLERLVVNQEIASITIKVPKMVKTDLNDFMISLPGKTIQQVLRRGKYL
LFDFGEMVMVSHLRMEGKYLLFPNKVPDNKHFHLYFKLTNGSTLVYQDVRKFGTFELVRK
SSLKDYFTHKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGLGNIYVDEVLW
AAKIHPQRLANQLTESETSLLHKEIIRILTLGIEKGGSTIRTYKNALGEDGTMQKYLQVY
GKTGQPCPRCGCLIKKIKVGGRGTHYCPRCQCL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtagaaaccgttagaaaaggactagaaagacttgtagttaat
caagaaatagcttctataacgattaaagtccctaaaatggtgaaaactgatttgaatgac
ttcatgataagtctaccaggaaaaacaattcaacaggtattgagacgagggaagtatctt
ctttttgattttggtgaaatggttatggtatcacatttacgcatggaaggaaaatatcta
ctcttcccaaataaagtaccagataacaaacattttcacctttatttcaaattgactaat
ggtagtacattggtttatcaagatgtccgtaaatttgggacatttgagttggttcgtaaa
tcatctctcaaagattattttactcataaaaaattaggtcctgagccaactgctgacaca
tttcaatttgagcctttttcaaaaggcttagcaaactccaaaaagccaataaaaccttta
ctattagatcagagattagtagcaggacttggaaatatttatgtagatgaagtcttgtgg
gcagcaaaaattcacccacagcgtttggctaatcaattgaccgaatctgaaacaagctta
ttacacaaggaaattattcgcattttaactttaggcatcgaaaaaggtggctccacgatt
agaacatataagaatgctcttggagaggacggtacgatgcaaaagtatttacaggtctat
ggtaaaactgggcaaccatgtccaaggtgtggttgtttaattaagaagataaaagtagga
gggagagggacgcattattgccctcggtgtcaatgcttatga
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