Staphylococcus agnetis: EP23_00550
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Entry
EP23_00550 CDS
T04155
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sagq
Staphylococcus agnetis
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagq03400
]
EP23_00550 (addA)
Enzymes [BR:
sagq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP23_00550 (addA)
DNA repair and recombination proteins [BR:
sagq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EP23_00550 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
Viral_helicase1
AAA_12
ResIII
DUF3799
DUF1363
DUF5413
Motif
Other DBs
NCBI-ProteinID:
ALN75951
UniProt:
A0AB73NCT3
LinkDB
All DBs
Position
106809..110450
Genome browser
AA seq
1213 aa
AA seq
DB search
MTIPEKPKDVQWTDAQWESIYAKGKDVLVAAAAGSGKTAVLVERIIQRILKDGIDVDRLL
VVTFTNLSAREMKHRIEARIHQAALEDPSNQHIKNQLAKIHQAQISTLHSFCLKLIQQHY
DILNIDPNFRTASEVENVLLLESVIDEVFEAHYAQLDPHFVDLTEQVGSDRNDERLRQIV
KSLYYFSVANPEPEKWLDQLDAPYIERHLQSHYLNIINQYSLLYLKAAQDAIEQAYAQLE
VLGDLDKHIVFIDEHRRALQQLLSESQINKKKLQTYEFGRMPTKPKDIGKDEMQNDMYET
FKAHFDQFKSFMSKVKDELVARDDDALVDELAHLAPRVRYLSQLTKDVISTFNKAKRERN
LLDFTDYEHFALKILYDASGQPSDIADVYRQKFEEILVDEYQDTNRVQEQIISSFKRGDT
SNGNLFMVGDVKQSIYKFRQADPSLFIEKYQAFNQPDGSSGWRIDLSQNFRSRKEVLNTT
NYLFHHMMDTEIGEIEYDAAARLYYGAPFDDADVPLHFNVLLEDESSDLTGSEQEVHLIA
EQVTSIINTKKVYDVKTKQYRPATYKDIVILERSYSNARNLQHVFKDRDIPLYVNSKQGY
FEQTEIRLMLSFLRVIDNPLQDIYLVGLMRSVIYQFTEDELAEIRVVSPHDDYFYQSIQH
YMKSEDAQPNILDKLSRFMNDLSMYRTYSQSHPVYQLIDKIYNDHYLIQYFSGLIGGKGR
RANLHGLFNKAVDFEQSSFRGLFQFIRFIDQMIERGKDFGEENVIGPNDNVVRMMTIHSS
KGLEFPFVIYSGLTRDFNMTDLNQPVILNQYEGLGLQYYDETHGLFYPSLISMSIELVNR
KEIISEEMRLIYVALTRAKEQLFLIGREKKETKLNALTQASIAHDKLTSLYRFNARNPFE
LIYSIFSKYHNTSLINDLRFKDEQENDTSLTPSISVHHIQASDVLPQTQHEVSGVNLETL
EVETNQAAQNASIIQEIENRLLFQYPYEHTQHLASKQSVSELKRQLDTEQADTNYDRVRQ
YRLGVATYQRPAFLESQKRTASEIGTLMHTVMQHLPFDEHRLSDEALQQYIESLVTRAII
PEDAVKDIRIEEVKRFVQSDLYLTIAQSDTLYRELPFIVNQYDMEKGTHETDAAIIQGMI
DVVFVKDGKHYFVDYKTDAFVRRRGMTEEQVGEQLKNKYQVQMKYYQKALETITGQKVSG
YLYFFKYGALVID
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgacgatacctgaaaagcccaaagatgttcaatggacagatgcccaatgggaaagtatc
tatgccaaaggtaaagatgtacttgtagctgcagcagcagggtcaggtaaaacagctgtt
ttagtagaacggattattcaacgcatccttaaagatggtatcgatgtagaccgtttactt
gtcgtaacatttacaaatttaagtgcgcgtgaaatgaagcatcgtatcgaagcacgtata
catcaagccgcacttgaagacccttccaatcaacatattaaaaatcaattggcgaaaata
catcaagctcaaatttctacattgcatagtttttgtttgaaattgattcaacaacattat
gatattttgaatatagaccccaatttccgaacggcaagtgaagttgaaaatgtactcctt
ttagagtcggtgatagatgaagtctttgaagcacattatgcgcaacttgacccacacttc
gttgatttaacagaacaagtcggctcggatcgcaatgatgaacgcttgagacaaatcgtt
aaaagtttgtattactttagcgtcgccaatcctgaacctgaaaaatggttggatcaactc
gatgccccttatatcgaacggcatttgcaaagtcattatctgaacattattaatcaatat
agtttgctttacttaaaggcagctcaagatgccattgaacaagcctatgcacagttagaa
gtattaggagacctagataaacacattgtttttatagatgagcatcggcgtgcgttacaa
caacttttgtctgaatcacaaatcaataaaaagaaacttcaaacgtatgaatttgggcgc
atgcctacgaaacctaaagacattggtaaagatgagatgcaaaatgacatgtatgagaca
tttaaagcgcattttgatcaatttaaatcatttatgtcgaaagttaaagatgaacttgta
gcacgcgatgatgatgcacttgtagatgaacttgcgcatttagcaccgcgcgtacgttat
ttaagtcaattaactaaagatgtgatttcgacttttaacaaagccaaacgcgaacgcaat
ctgttagattttacagattatgaacactttgcattaaaaattttatacgatgcatcgggg
caaccttctgatatagcagatgtttaccgacaaaaatttgaggagattttagtcgatgaa
tatcaagatacaaatagagtgcaagagcaaattatctcaagttttaaacgtggtgatacc
tcaaatggtaacttgttcatggtgggtgatgtgaagcaatctatctataaatttagacaa
gcagatccaagtttatttattgagaaatatcaagcgtttaatcaacctgatgggtctagt
ggttggcgcattgatttgtctcaaaatttcagatctcgtaaagaagttttaaatacaacc
aattacttatttcatcatatgatggatactgaaataggcgaaatagagtatgatgctgcg
gcaagattatattacggcgcaccgtttgatgatgctgatgtccctttacattttaatgtc
cttcttgaagatgaatccagtgacttgactggttctgaacaagaggtacatttaattgca
gaacaggtaacttctatcattaatacaaaaaaagtatacgatgtgaaaacgaagcagtat
cgaccagcgacgtataaagatatcgttatattagagagaagttatagtaatgcccgcaat
ttacaacacgtatttaaagatagggatatcccattatatgtgaatagtaaacaaggctat
tttgaacaaacggaaataaggctaatgttgtcgtttctaagagtgattgataatccactt
caagatatttatctcgttggtttgatgcgttctgttatttatcaatttacggaagacgaa
ttagctgaaattcgagtcgtgtcaccgcatgacgattatttttatcaatccatccaacat
tatatgaaatcagaagatgcgcaacctaacatacttgataagttatcgcgatttatgaat
gatttgtctatgtaccgcacatacagtcaaagtcacccggtttaccaattaatcgataaa
atttacaatgaccattatttaattcagtattttagtggcttaattggcggtaaagggcga
cgtgcgaatcttcatggactgtttaataaagcagttgattttgaacaatctagttttaga
ggtctatttcaatttattcgttttatcgatcaaatgattgagcgcgggaaagattttggt
gaagaaaatgtgataggtcctaatgacaacgtggtgcgtatgatgaccattcatagcagt
aaaggattggagtttccgtttgtaatttactctggactcacacgtgactttaatatgaca
gatttaaatcagcctgttattttaaatcaatatgaaggtttagggctacaatattatgat
gagacacacggtttgttttatccatcgttgatatcaatgagtatagaattagtgaatcgt
aaagaaattatttccgaggaaatgagacttatttacgtcgcattaacacgagcgaaggaa
caactctttttaatcggtcgagagaaaaaagaaactaagttaaacgctttaacccaagcc
tctatagcacatgacaagttgacgtcattataccgttttaatgcacggaatcctttcgaa
ttgatttacagtatttttagcaagtatcacaatacctctttaattaatgatttaagattt
aaagatgaacaagagaatgacacctcgcttacgccgtcaatatcagtgcatcatattcaa
gcatcagatgtcttaccgcaaacacaacatgaagtgtcaggtgtgaatctagagacgctt
gaagtggagacgaatcaagcggcacaaaacgcgtcgatcatccaagagattgaaaaccga
ctattattccaatatccttatgaacacacgcagcatttagcatctaaacaatctgtttca
gaattaaagcgtcaacttgatactgaacaagcagataccaattatgatcgtgtccgtcaa
tatcgattaggggttgcaacatatcaacgtccagcgtttctagagtctcaaaaacgtaca
gcatcagaaattggaacattaatgcatactgtgatgcaacatttgccttttgatgagcat
agactttctgatgaggcgttacagcaatacattgaatcactcgtgacgcgtgcgattata
cctgaagatgcagtgaaagatatacgcatagaagaagtgaaacgatttgttcaaagtgat
ttatatcttactattgcacaaagcgacacgctatatcgtgaattaccttttatcgtaaat
cagtacgatatggaaaaaggcacgcacgaaactgacgcagcaatcatacaagggatgata
gatgttgtctttgttaaagatgggaaacattattttgtagattataaaacagatgctttc
gtgagacgtcgaggcatgacagaagaacaggtaggcgaacagcttaaaaacaagtatcaa
gttcagatgaaatattaccaaaaagctttagagacaattacaggtcaaaaggtgtcggga
tatttatatttctttaagtatggcgcattagtaatagattaa
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