Staphylococcus agnetis: EP23_01810
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Entry
EP23_01810 CDS
T04155
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
sagq
Staphylococcus agnetis
Pathway
sagq00020
Citrate cycle (TCA cycle)
sagq00190
Oxidative phosphorylation
sagq00650
Butanoate metabolism
sagq00720
Other carbon fixation pathways
sagq01100
Metabolic pathways
sagq01110
Biosynthesis of secondary metabolites
sagq01120
Microbial metabolism in diverse environments
sagq01200
Carbon metabolism
Module
sagq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sagq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EP23_01810 (sdhB)
00650 Butanoate metabolism
EP23_01810 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
EP23_01810 (sdhB)
00720 Other carbon fixation pathways
EP23_01810 (sdhB)
Enzymes [BR:
sagq01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
EP23_01810 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_2
Fer4
Fer4_13
Fer4_18
Fer4_21
Fer4_16
Fer4_4
Fer4_15
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
ALN76179
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Position
353963..354784
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AA seq
273 aa
AA seq
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MVETKEQVSNEGQQQQTTHHNNKTIKLIIKRQDNANSKPYEEGFEIPYRENLNVIACLME
IRRNPINDKGEKTTPVTWDMNCLEEVCGACSMVINGRARQSCSTIVDQLEQPIRIEPMNT
FPVIRDLQVDRSRMFDNLKRMKAWIPVDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCL
EVCPNVTPSNDFVGAQAISQVRLFNLHPTGAMTKDERLDALMDQGGLQACGNSQNCVQAC
PKGIPLTTSIAALNRETSFHMFKSFFGSDHKVD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaacgaaagaacaagtttcaaatgaaggacaacaacagcaaacaacacatcat
aataataaaacgattaaattgattattaaacgtcaagataatgcaaattcaaaaccatat
gaagaaggtttcgaaattccttatcgtgaaaatttaaacgtaatcgcttgtttaatggaa
attcgtcgtaaccctatcaatgataagggtgaaaaaacgacacctgttacttgggatatg
aactgtcttgaggaagtttgtggtgcatgttcaatggttatcaacggtcgtgctcgccaa
tcttgttcaacaatcgtagaccaattagaacaaccgattcgtattgagccgatgaacacg
ttccctgtgatccgagacttacaagttgatcgctcacgtatgtttgataatttaaaacgc
atgaaagcatggattcctgtagatggcacatacgatttaggtcctggaccacgtatgcct
gagaagaaacgtcaaacagcttatgagttatctaaatgtatgacgtgtggtgtgtgttta
gaagtttgtcctaacgtgacgccttcaaatgactttgtgggtgcacaagccatttcacaa
gtacgtttgtttaacttgcatccaactggtgcaatgacaaaagatgaacgacttgatgca
ttgatggatcaaggtggtttacaggcctgtggtaactcacaaaactgtgttcaagcatgt
ccgaaaggcatacctttaacaacgtcaattgcagcacttaatcgtgaaacatcattccat
atgttcaagtcattctttggctcagatcataaagtagactaa
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