Staphylococcus agnetis: EP23_03420
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Entry
EP23_03420 CDS
T04155
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sagq
Staphylococcus agnetis
Pathway
sagq00010
Glycolysis / Gluconeogenesis
sagq00020
Citrate cycle (TCA cycle)
sagq00260
Glycine, serine and threonine metabolism
sagq00280
Valine, leucine and isoleucine degradation
sagq00310
Lysine degradation
sagq00380
Tryptophan metabolism
sagq00620
Pyruvate metabolism
sagq00630
Glyoxylate and dicarboxylate metabolism
sagq00640
Propanoate metabolism
sagq00670
One carbon pool by folate
sagq00785
Lipoic acid metabolism
sagq01100
Metabolic pathways
sagq01110
Biosynthesis of secondary metabolites
sagq01120
Microbial metabolism in diverse environments
sagq01200
Carbon metabolism
sagq01210
2-Oxocarboxylic acid metabolism
sagq01240
Biosynthesis of cofactors
Module
sagq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sagq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sagq_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sagq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
EP23_03420 (lpdA)
00020 Citrate cycle (TCA cycle)
EP23_03420 (lpdA)
00620 Pyruvate metabolism
EP23_03420 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
EP23_03420 (lpdA)
00640 Propanoate metabolism
EP23_03420 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EP23_03420 (lpdA)
00280 Valine, leucine and isoleucine degradation
EP23_03420 (lpdA)
00310 Lysine degradation
EP23_03420 (lpdA)
00380 Tryptophan metabolism
EP23_03420 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EP23_03420 (lpdA)
00670 One carbon pool by folate
EP23_03420 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sagq04147
]
EP23_03420 (lpdA)
Enzymes [BR:
sagq01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
EP23_03420 (lpdA)
Exosome [BR:
sagq04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
EP23_03420 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
NAD_binding_8
DAO
GIDA
AlaDh_PNT_C
Pyr_redox_3
FAD_oxidored
HI0933_like
FAD_binding_2
3HCDH_N
FAD_binding_3
Trp_halogenase
2-Hacid_dh_C
Lycopene_cycl
XdhC_C
UDPG_MGDP_dh_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ALN76485
UniProt:
A0AB73NV99
LinkDB
All DBs
Position
complement(706860..708278)
Genome browser
AA seq
472 aa
AA seq
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MTKEKYDLVVLGGGIAGYSAAIRASQLGKSVALVEKDKVGGTCLHRGCIPTKSFLKSAEV
YQYIQHADQYGLSVEGASVNFQSVLERKSRIVETMYNGVQHLVKQNKIDLFQGTGRLLGA
SIFTPQSGTVSVEYDDGESELLPNDYVLIATGSKPIELPMLPFDHRVILSSDDMMQLSTL
PKRMAIVGGGVIGLEFASLLNSFGVEVTIIEAGERILINEPASVSRQLKQHLSKEGIHIL
ENTAVTEEAVTITEHDVTFELDDTLTVDKVLVAVGRQALTDDLGLNNTKVALSNKKTIQT
DAFMQTADQHIYAAGDVIGQLQLAHVGAKEGVIAVEHMFNENPLAIDYNLMPRCVYTRPE
VASLGMTVDVAKKQGYTTHVVKAPFKANGKALIASQQDPDGFAELVFDKETQTFLGAALI
GPNVTELINELSLLSFMDGSALELGSATHAHPSISELLMELGLKAENQSIHI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaaaatacgatttagttgtattaggtggaggtattgctggttattcagca
gcaattcgtgcgagtcagctcggtaaatccgttgctttagtagaaaaagacaaagttgga
gggacatgtttacatcgtggatgtatccctacaaaatcatttttaaagtcagctgaagta
taccaatacatacaacatgctgatcagtacgggctctctgttgaaggcgcatctgtcaac
tttcaaagtgttttagaacgcaaatcacgaatcgtagaaacgatgtacaatggtgtccaa
catcttgtaaaacaaaataaaattgatttatttcaaggcacgggtcgtttattaggtgct
tctatatttacaccacaaagtggaactgtatctgtggagtatgacgacggcgaatctgag
cttttacccaatgactacgtgttaattgcaacaggttctaaacccattgaattaccaatg
cttccatttgaccaccgtgtcattttaagtagtgatgatatgatgcaattatcaacatta
ccaaaacgtatggcgattgtcggtggtggtgtgattggcttagaatttgcaagcctgttg
aattcatttggtgtcgaggtaacaattattgaagctggtgaacgtattttaatcaatgaa
ccagcgtcagtcagtcgccaattgaagcaacatctctctaaagaaggcattcacatttta
gaaaataccgctgtaacagaagaagctgtgacaattactgaacatgatgtaacgtttgag
ctagacgatactttaacagtagataaggtacttgtagctgttggtcgtcaagcactaact
gatgatttaggacttaataatacgaaagtcgctttatctaacaaaaagacaatacaaact
gatgcatttatgcaaacagctgatcaacatatttatgcagctggcgatgttatcggtcaa
cttcaacttgcacatgtaggtgctaaagaaggggtaattgcagttgaacacatgttcaat
gaaaatcctcttgctatagattataacttgatgccacgttgtgtatacacacgcccagag
gtcgcttcattaggaatgaccgtagacgtagctaaaaagcaaggatatactacgcatgtt
gtgaaagcaccgtttaaagcgaatggtaaagcattgatcgcatctcaacaagatcctgat
gggtttgcagaactcgtgtttgataaagaaacacaaacatttctaggtgctgcactgata
ggacctaatgtcacagagcttattaatgagctttcgctgttaagttttatggatggatcc
gcgttagaacttggtagtgcgacacatgcacatccatcgatatcagaattattaatggaa
ctcggtttaaaagctgaaaatcaatcaattcacatctag
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