Staphylococcus agnetis: EP23_03655
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Entry
EP23_03655 CDS
T04155
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sagq
Staphylococcus agnetis
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagq03019
]
EP23_03655
03009 Ribosome biogenesis [BR:
sagq03009
]
EP23_03655
Enzymes [BR:
sagq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EP23_03655
Messenger RNA biogenesis [BR:
sagq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EP23_03655
Ribosome biogenesis [BR:
sagq03009
]
Prokaryotic type
rRNA helicases
EP23_03655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALN76527
UniProt:
A0ABX3Z6U9
LinkDB
All DBs
Position
complement(749034..750374)
Genome browser
AA seq
446 aa
AA seq
DB search
MPKHPFGHFSFDPSLIEAIDELNFKQPTDVQQRVIPRLLKRVNLIGQSQTGTGKSHSFLL
PIFQLLDNDINEPQAIIVAPTRELATQLYHAALQLANHKKGIKVSLFIGGTDFEKDKQKT
TQQPQLVIGTPTRINDLAKANALHVHLAQQLIVDEADLMIDLGLIQEVDQIASRLDKSAK
MAVFSATIPKSLHPFLNKYLQNPEFVEVKTEQKNKKNITFYLIPTRGTEKLEKTIELIDT
INPYLGIIFCNSRENADDLAEKLNQKGIQVGMIHGGLSPRERKQQMKRIRNLNFQYVIAS
DLASRGIDIEGVSHVINYDVPLDIDFFTHRVGRTGRGNYKGIAITLYKPDEEYLIHQIEQ
KGYQFENVDIKNGELKPIKAHNTRRLRQKQEDHITQQVKNKVKRNNKKKVKPGYKKKFKQ
EVENLKRQEKRQHSRRKKRLDRKNKK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcacccatttggtcattttagttttgacccaagtttaattgaagcaatagat
gaattaaactttaaacaaccgacagacgttcaacaacgtgtcattcctagattattaaaa
cgcgtcaatcttatagggcaatcacaaactggaacaggaaagtcacactcatttttacta
cccattttccaattattagataatgatataaatgaaccacaagctatcattgtagcgcct
acgagagaattggctacacaactctatcatgctgcacttcaattagctaatcataaaaaa
ggaattaaagtgagtttatttataggtggaacagattttgaaaaagataagcaaaaaaca
actcaacaacctcagctcgttatcggtacacctacgagaattaatgacttagctaaagcc
aatgcgctgcatgttcatttagcgcaacaacttatcgttgatgaagcagacttaatgata
gatttaggtctaattcaagaagttgatcaaatagcgtctcgtttagataaatcggctaaa
atggcagtgtttagtgctacaataccgaaatctttacatccatttttaaataaatattta
caaaacccagaatttgttgaagtaaaaactgaacaaaagaataagaagaatataacattt
tacttaatacctacacgcggtactgaaaagttagaaaagacgattgaactcatagatacg
attaatccatatttaggtattatattctgtaacagtcgagaaaatgctgatgatttagca
gaaaaactaaatcaaaaagggattcaagtagggatgattcatggtggcttatctcctcgt
gaacgtaaacaacaaatgaaacgaattcgaaatttaaacttccagtatgtcattgcgagt
gatttagcatctcgtggtattgacatagaaggtgttagtcatgtaatcaattatgatgtg
cctttagatatagatttctttacgcatcgcgttggtcgtacaggtagaggaaattataaa
gggattgcgatcacactttataaaccagacgaagaatatctaattcatcaaattgaacaa
aaaggctatcaatttgaaaatgttgatattaaaaatggtgaattaaagcctatcaaagca
cataacacgcgtcgtctaagacaaaaacaagaagatcacattacacaacaagtgaaaaat
aaagttaaacgtaataataagaaaaaagttaaaccaggctataaaaagaaattcaaacaa
gaagtcgaaaatttaaaacgtcaagaaaaaagacaacatagtagacgtaaaaaacgtctt
gatcgtaaaaataaaaaataa
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