Staphylococcus agnetis: EP23_03675
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Entry
EP23_03675 CDS
T04155
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sagq
Staphylococcus agnetis
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EP23_03675 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sagq03021
]
EP23_03675 (rpoD)
Transcription machinery [BR:
sagq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EP23_03675 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
ALN76530
UniProt:
A0A085UG70
LinkDB
All DBs
Position
complement(753462..754571)
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AA seq
369 aa
AA seq
DB search
MSDNQVKVIKKETIDPTLTLEDVKKQLIEKGKKEGHLSHEEVADKLQNFDMDSDQMDEFF
DMINDNDIQLVNEKDSSDTDDKLNPSDLSAPPGVKINDPVRMYLKEIGRVDLLSAQEEIE
LAKRIEQGDEVAKARLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEI
GEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQ
LEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSR
SKRLKDFMD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaccaggtaaaagtaattaaaaaagagactatcgatcctactctaacacta
gaggatgttaaaaaacagttaattgaaaaagggaaaaaagaaggtcacctaagccatgaa
gaagtagcagacaaattacaaaacttcgacatggattcagatcaaatggacgaatttttt
gacatgattaatgataatgatattcagttagtcaatgaaaaagatagttctgataccgat
gataaattaaatccaagcgatctaagtgcacctccaggcgttaaaattaacgatccagtt
cgcatgtatttaaaagaaattggccgtgtagacttattaagtgctcaagaagaaattgaa
cttgcgaaacggatagaacaaggtgatgaagtcgctaaggcaagattggcagaagctaac
ttaagacttgttgtcagcattgctaaacgttatgtaggacgtggcatgctctttttagac
ctcattcaagaaggaaacatgggccttattaaagctgttgaaaaatttgactttagcaaa
ggttttaaattttcaacctatgcgacatggtggattagacaggctattacacgtgcgatt
gctgaccaagcacgtaccattcgtattccagtacacatggttgaaacgattaacaaatta
attcgtgttcaacgtcaattattacaagacttaggtcgtgacccagcaccagaagaaatt
ggtgaggaaatggatttaccacctgaaaaagtacgtgaaattcttaaaatcgctcaagaa
cctgtttcacttgaaacacctattggtgaagaagacgacagtcacttaggagattttatt
gaagaccaagaagcgcaaagtccgtcagaccatgcggcatatgagttattaaaagagcag
ttagaagatgtattagatactttaacagatcgtgaagagaatgtattacgtttacgattt
ggtcttgatgatggacgtacacgtacacttgaagaagtcggaaaagtttttggtgtcaca
cgagaacgtattcgtcaaatcgaagcgaaagcattacgtaaattgagacacccaagtcgc
agtaaaaggcttaaagattttatggattaa
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