Staphylococcus agnetis: EP23_03800
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Entry
EP23_03800 CDS
T04155
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sagq
Staphylococcus agnetis
Pathway
sagq03030
DNA replication
sagq03430
Mismatch repair
sagq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EP23_03800 (holA)
03430 Mismatch repair
EP23_03800 (holA)
03440 Homologous recombination
EP23_03800 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagq03032
]
EP23_03800 (holA)
03400 DNA repair and recombination proteins [BR:
sagq03400
]
EP23_03800 (holA)
Enzymes [BR:
sagq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EP23_03800 (holA)
DNA replication proteins [BR:
sagq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EP23_03800 (holA)
DNA repair and recombination proteins [BR:
sagq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EP23_03800 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Sigma70_r4_2
DUF1456
DUF6165
DUF6568
Motif
Other DBs
NCBI-ProteinID:
ALN76554
UniProt:
A0ABX3Z479
LinkDB
All DBs
Position
complement(778470..779447)
Genome browser
AA seq
325 aa
AA seq
DB search
MPTPIYTVYGDIPELIEKETNHIINNYLDGEPKDDFNYIKFNLYETNFNQIIEEAMTMPL
FSSKKVVLIQNAYIFTGEKVAKDQVVDMNTVIEFLEKYDGDTLVVFEVTTLKLDERKKVV
KTLKKQAKLKKVEQMSEAEMKQWIHSYLNQNYKEIKQDALDQFLTLTGIHYQLINQELEK
LLLYIGDKPTINLEDIRSIVNRSLEQNVFLLTEHIQNKQKQKAVLLMRDLIQLKEEPIKL
LALITSNYRLYYQSLILNQKGYSEQQIAKTVGAHPYRVKLALRQARQYSLESLLDKMNIC
AETDYQLKSSYMDKVLLLELFILKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgccaatctatactgtgtatggagacatacctgaattaatagagaaagaaacg
aaccatatcattaataattatttagacggcgaacccaaagacgactttaactatataaaa
tttaatttatatgaaacaaactttaatcaaattattgaagaagcaatgacaatgccgtta
ttttcttcaaaaaaagtagtgcttattcaaaatgcatacatttttactggagaaaaggtt
gcgaaagatcaagttgtcgatatgaataccgttattgaatttctagaaaaatatgacgga
gatacgcttgtagtctttgaagtaacaacgctcaagcttgatgaacgtaaaaaagtggtt
aaaacattaaaaaagcaggcgaagttaaaaaaagttgaacaaatgtctgaagctgaaatg
aagcaatggattcattcttatttaaatcagaattataaagagataaaacaagatgcttta
gatcaatttttaacattgactggcattcattatcaactcattaatcaagaacttgaaaaa
ttattattatatattggggataaacctacgattaaccttgaagatataagatcaatcgta
aatcgtagcttagaacaaaacgtttttttattaaccgagcatattcaaaataaacaaaag
caaaaagcagtcttgttaatgcgcgatttaatacaattaaaagaagagcctattaaatta
ctagctttaattactagcaattatagactatattatcaaagtttaatattaaatcaaaaa
ggctattcagagcaacaaatcgctaaaacggttggtgcacatccttatcgcgtaaaactt
gcattaaggcaagcacgtcagtattccttagaatcattacttgataaaatgaatatttgc
gctgaaacagattatcaacttaaatcatcttatatggacaaagtattacttcttgaatta
tttattttaaaattgtaa
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