Staphylococcus agnetis: EP23_04285
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Entry
EP23_04285 CDS
T04155
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sagq
Staphylococcus agnetis
Pathway
sagq03030
DNA replication
sagq03430
Mismatch repair
sagq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EP23_04285
03430 Mismatch repair
EP23_04285
03440 Homologous recombination
EP23_04285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagq03032
]
EP23_04285
03400 DNA repair and recombination proteins [BR:
sagq03400
]
EP23_04285
Enzymes [BR:
sagq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EP23_04285
DNA replication proteins [BR:
sagq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EP23_04285
DNA repair and recombination proteins [BR:
sagq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EP23_04285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALN76650
LinkDB
All DBs
Position
complement(881622..884813)
Genome browser
AA seq
1063 aa
AA seq
DB search
MVAHLNIHSSYDLLNSSIRIERIVVKAKQEGYTAIALTDLNVMYGIPQFYDTCVKVGIHP
IVGLTIHVTDGLIEKEVVLLAKNNEGLKGLYRLSSEINLNDTTQVNIHDLPQYSAHTVAI
FKDVNQEVASWFDALPQTTSVYTDHRSTLDNVSKTWIDATYYETPDDKDTVAVLGAIRDN
TKLNLMDMEQASECHFKTIESLQAMNLPPEWLTTTDEIANLCKAELVYHQPLLPEFQTPQ
GMDADTFLWEQLQNALTRRHLTSRMYQERLAHEFQTIKTMGYSDYFLIVSDLINYAKNNG
VMVGPGRGSSAGSLVSYLLNITTIDPLKYDLLFERFLNPERVTMPDIDIDFEDTQREKVI
HYVQEKYGAFKVAGIVTFGHLLAKAVARDVGRVMGFDEATLSEASKLIPSKLGITLDEAY
TSEAFQQFVHRNHRHEQWFELCKKLEGLPRNTSTHAAGVIVNDQPLYETIPLVQGETGLL
TQWTMTEAERLGLLKIDFLGLRNLTIIHQVVKQVHQNLGVHIDIEAIPFNDKAVFQLLSK
GETTGIFQLESEGVRRVLQKLKPQHFEDIVAVTSLYRPGPMEEIPTYIKRRHEPTTVTYL
HPDLEPILKKTYGVIIYQEQIMQIASQFAGFSYGEADILRRAMSKKNRAVLENERQHFIE
GASKKGYQKALSEEIFDLILKFADYGFPRAHAVSYSKIAYIMTYLKVHYAPFFYANILSN
VIGNEVKTSQMIYEAKQQHIAINGPHINYSHWRYRTYKNQIYISLGAIKSVGYQSVQTIV
KERQENGPYKDLFDFCQRIPGRVRSRRLLEALILSGAMDCFNKNRATLLQSIDKVSDIQS
DLDQTFLEAFSTTKQEYDETEEMPDQQKSNYEKHYLGFYVSKHPAEKAFERKQYLGVFPL
TMKAHNEPILVMLEDLKVIRTKKGQQMAFVVLNDGVRQLDGVIFPNLYQTIGSRIDKHQF
YVVEGKFERRNNKVQLVINSFKGLEQFEKDKLAATRKIVIREKLSDDIKQYIYQSDVSAG
LKDGVHVVFFDNDAKQTFNLGLIEKRHIQTLIQSMSPKNIRLL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcatttaaatatacattcatcatatgatttgctcaattcaagtattcggatt
gagcgtattgtagttaaagccaaacaagaaggttacacagccattgcacttactgacctt
aatgtcatgtatggtataccacaattttatgatacgtgtgtaaaagttggtattcatcct
atagtgggacttacgatacatgtaactgatggattaatagaaaaagaggttgtcttgctc
gctaaaaacaatgaagggttaaaaggattatatcgcttatcttcagagataaacttaaat
gacactacacaagttaatattcatgatttaccccaatatagcgcgcatacagtggcaata
tttaaagatgttaatcaagaggtggcatcttggtttgatgccttacctcaaacgacttct
gtttacacggatcaccgttcgacccttgataacgtctcgaaaacttggatagatgcgaca
tattatgaaacaccggacgataaagacactgtagccgtattaggtgccattcgagacaac
accaaattgaaccttatggatatggaacaagcatctgaatgccacttcaaaacgatagaa
tcattacaagctatgaatttacctcctgaatggttgacaacaacagacgaaattgcgaat
ctttgtaaggccgagttagtctatcatcaacctttattaccagaatttcaaacacctcaa
gggatggatgcagatactttcttatgggagcaattacaaaacgcattaacacgccgacat
ttaacttctcgaatgtatcaagagcgcctagctcacgaatttcaaacgataaaaaccatg
gggtatagtgattatttcttaattgtgagtgatcttattaattatgccaaaaataatgga
gttatggtcgggcctggtcggggttcttctgcaggctccttagtcagttatttattaaat
atcacaacgattgaccccttaaaatatgatttactatttgaacgttttttaaatcctgaa
cgtgtaacaatgccagatattgatattgattttgaagatacgcaacgtgaaaaagtcatt
cattatgttcaagaaaagtatggtgcattcaaagtggcaggaatcgttacatttggtcat
cttttagcaaaagcagtagcgcgagatgtaggtcgtgtcatgggatttgatgaagcaacg
ttaagtgaagcctctaaacttatcccaagtaaacttggtatcactttggatgaagcttat
acgtcagaagcatttcaacaatttgtgcaccgtaatcatcgtcacgaacaatggtttgag
ttatgtaaaaaattagaaggtttaccgcgaaacacctccactcatgccgcaggggttatc
gttaatgaccaaccattatatgaaacgatacctttagtgcaaggggaaacaggtctactt
acccaatggacaatgacagaagctgaacgtctaggtcttttgaaaattgattttttaggc
ttaagaaatttaaccattattcatcaagtagtcaaacaagtgcatcaaaatttgggtgtt
cacattgatattgaagccattcctttcaatgataaagcagtttttcagttgctttctaag
ggagagactacgggaatatttcaactcgaatctgaaggcgtacgtcgggtacttcaaaaa
ttaaagccacaacattttgaagatatcgttgccgtaacctctttatatagacctggtcca
atggaagaaatcccaacatatattaaacgtcgccatgaacctactacagttacgtacttg
catcctgatttagaacctattttaaaaaagacctatggcgttattatttatcaagaacaa
atcatgcaaatcgcgagccaatttgctgggtttagttacggagaagcagatattttaaga
cgtgcaatgagtaagaaaaatagagcagttctagaaaatgaacggcaacattttatcgaa
ggcgcatcaaaaaaaggttatcagaaagccctaagtgaagaaatttttgacctgatttta
aagtttgcagattacgggttcccaagagcacatgctgtaagttactctaaaattgcctac
attatgacttatttaaaagtacactatgcaccatttttctatgcaaatattttaagcaat
gtgattggtaatgaagttaaaacttcacaaatgatttatgaagcaaaacaacaacatata
gcaattaatggcccgcatattaattatagccattggcggtatcgcacatataaaaatcaa
atctatatttcattaggagccattaaaagcgtgggttatcaaagtgtgcaaacgattgtg
aaagagcgtcaagagaatgggccgtacaaagacctgtttgatttttgtcagagaatacct
ggaagagtgcgttcaagacggttattagaagcattaatattatcaggggcgatggattgt
tttaataaaaatcgggcgacacttttacaatctatagacaaagtcagtgatattcagtct
gacttagaccaaacatttttagaagcattttctactacaaaacaagaatatgatgaaact
gaggaaatgcctgatcaacaaaaatcgaattacgaaaaacattatttagggttttacgta
tctaaacaccccgcagaaaaagcttttgaacgcaaacaatatcttggagtctttccattg
accatgaaagcgcataacgaacctatactcgttatgcttgaagatttaaaagtaatccgt
actaaaaaaggacagcaaatggcctttgtagttttaaatgatggtgtacgtcaattggat
ggtgttatattcccgaatttgtatcaaacgataggttctcgtattgataaacatcaattt
tatgttgtggaaggaaagtttgaacgtcgcaacaataaggttcaacttgttatcaatagt
tttaaaggcttagaacaatttgaaaaagacaagctggctgcgacacgaaaaattgttatt
agagaaaaattaagcgatgacataaaacaatacatctatcaaagtgatgtatcagcaggc
ctaaaagatggcgtacatgttgtgttttttgataatgatgctaaacaaacatttaattta
gggctaatagagaaacgtcatatacaaacgctcattcaatctatgagcccgaaaaatata
agattattataa
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