Staphylococcus agnetis: EP23_06190
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Entry
EP23_06190 CDS
T04155
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sagq
Staphylococcus agnetis
Pathway
sagq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EP23_06190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagq03019
]
EP23_06190
03009 Ribosome biogenesis [BR:
sagq03009
]
EP23_06190
Enzymes [BR:
sagq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EP23_06190
Messenger RNA biogenesis [BR:
sagq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EP23_06190
Ribosome biogenesis [BR:
sagq03009
]
Prokaryotic type
rRNA helicases
EP23_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_19
CMS1
Cas3-like_C_2
SUa-2TM
DUF3744
AAA_30
PEHE
Motif
Other DBs
NCBI-ProteinID:
ALN76964
UniProt:
A0A2T4MF68
LinkDB
All DBs
Position
complement(1223674..1225161)
Genome browser
AA seq
495 aa
AA seq
DB search
MQNFTSLGVSERTAETLESMGFTEPTPIQKDSIPSALKNLDILGQAQTGTGKTGAFGIPL
IEKVVGQEGVRALILAPTRELAMQVAEQLREFSRGQKVQVVTVFGGMPIDRQIKSLKRGP
QIVVGTPGRVIDHLNRRTLKTQDVETLILDEADEMMNMGFIDDMRYIMDKLPAENRQTML
FSATMPRAIQELVQKFMKSPQIIKTMNNELSDPQIDEFYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKQGMAVTFVNPIEMDYIRQIEQANR
RQMRALRPPHRKEVLRAREEEIKSKVENWMAATKEPRVESIAQQLLEVYDHSDLVTALLQ
ELVESNDEVEVQLTFEKPLARKNRQPKGNRKGGSGKRHAKSRRGNKSGFSKKGNNHKEKR
ESKVKKGRTFADHQK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttacaagcttaggtgtttcagaacgtacagctgaaacattagagtcgatg
ggatttacggaacctacaccgatacaaaaggatagcattccatctgctcttaaaaattta
gatattttgggccaagcacaaacaggaacaggtaaaacaggtgcatttggtatcccatta
atagagaaagtagtgggccaagaaggtgtgcgcgctctgattttagcaccgacacgtgaa
cttgcaatgcaagtggcagaacaattacgtgaatttagccgtgggcaaaaagtacaagtt
gtaacggtatttggtggcatgccgatcgatcgacaaattaaatcattaaagcgtgggcct
caaattgtcgtaggtacacctggacgtgtgattgatcatttaaatcgtcgtacgcttaaa
acacaagatgtagaaacgttaattttagatgaagcagacgaaatgatgaacatgggcttt
attgatgatatgcgctacataatggataaattaccagccgagaatcgtcaaacaatgttg
ttctcagcaacaatgcctagagcaattcaagaacttgttcagaagttcatgaaatcaccg
caaatcattaaaaccatgaacaatgaattatctgatcctcaaattgatgagttttataca
attgtgaaagaactagaaaaatttgacactttcacaaacttcttagatgtgcatcaacca
gaacttgctatcgtttttggccgtacaaagcgtcgcgttgatgaattaacaagtgcgctt
ttatcgaagggatataaagcagaaggtttacatggggatattacgcaagcaaaacgatta
gaagttttgaaaaaatttaaaaatgatcaaatcgatatccttgttgcaacagatgttgcc
gcacgtggactagatatttctggtgtaagccatgtctataactttgatattcctcaagat
actgaaagttacacacaccgtattggtcgtacaggacgtgcaggaaaacaaggtatggcg
gtaacatttgtaaatccaatcgaaatggattacattcgtcaaatcgaacaagcgaaccgt
cgtcaaatgcgtgcattacgtccaccacaccgtaaagaagtgttacgtgcacgtgaagaa
gaaattaaatcaaaagttgagaattggatggctgcaacgaaagaaccacgtgttgaaagt
atcgcgcaacaattacttgaagtgtacgatcactctgatttagtgacagcactattacaa
gaactagtggagtcaaatgatgaagttgaagtacaacttacctttgaaaagcctcttgca
cgtaaaaaccgtcaaccaaaaggtaatcgtaaaggcggtagtggcaaacgtcatgcgaag
tcaagacgtggcaacaaatcaggtttcagtaaaaaaggtaacaatcacaaagaaaaacgt
gaatctaaagtgaaaaagggacgcacattcgcagatcatcaaaaatag
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