Staphylococcus agnetis: EP23_11235
Help
Entry
EP23_11235 CDS
T04155
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sagq
Staphylococcus agnetis
Pathway
sagq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EP23_11235 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sagq03021
]
EP23_11235 (rpoC)
03400 DNA repair and recombination proteins [BR:
sagq03400
]
EP23_11235 (rpoC)
Enzymes [BR:
sagq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EP23_11235 (rpoC)
Transcription machinery [BR:
sagq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EP23_11235 (rpoC)
DNA repair and recombination proteins [BR:
sagq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EP23_11235 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ALN77862
UniProt:
A0AAW9YR65
LinkDB
All DBs
Position
2289855..2293472
Genome browser
AA seq
1205 aa
AA seq
DB search
MIDVNKFHYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
SCGKYKRVRYKGMICDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFREYYDKFPGQFTAKMGAEGIKDLLE
EINLDEELKMLRDELESATGQRLTRAIKRLEVVESFRNSGNNPAWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPNLKMYQCGLPKE
MALELFKPFVMKELVQREIATNIKNAKTKIERTEDEVWDVLEDVITEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGLLFNDANEVIKAYANGYVHLHTRIGVQ
AASFNNPTFTEEQNRKILTTSVGKVIFNEIIPDSFAYINEPTATNLEKNTPDKYFVDASD
LGEGGLAEYFENTELVPPFNKKFLGNIIAEVFNRFSITDTSMMLDLMKDLGFKYSSKAGI
TVGVADIVVLPDKKEILDESEKLVERVQKQFNRGLLTEEERYNAVIEIWTNAKDQIQEEL
MQSLEKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMI
EPFIERIEGRYAKETIRHPETDKVIIRPDELITPDIAKEITDAGIEEMYIRSAFTCNTRH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRI
QEIFEARNPKGQAVITEIEGTIDNITIGKDRQQEIVVKGANETRSYLAPGTSRLKVEIGQ
AVERGEVLTEGSIEPKNFLAIAGLTATEAYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLR
KVRIIEAGDTKLLPGSLVDIHHFTDANREAFKERKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMKRYSQVDIEKEKSTIDAQE
HIVTE
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataaatttcattacatgaaaataggactcgcttcacctgaaaaaatc
cgttcttggtcatacggtgaggttaaaaagccagaaacaattaactatcgtactttaaaa
ccagaaaaagacggtctattctgtgaacgtattttcggaccaacaaaagactgggaatgt
agttgtggtaagtacaagcgtgtacgttataaaggtatgatttgtgaccgttgtggcgtt
gaagttacaaaatcaaaagtacgtcgtgaacgtatgggtcacatcgagcttgcggcacct
gtatcacacatttggtatttcaaaggcattccaagtcgtatgggcttattgctagatatg
tcaccacgtgccttagaagaagtcatttattttgcttcttacgttgtggtcgatccaggt
ccaactggtttagaaaagaaaacattactctcagaagctgaattccgtgagtactatgac
aaattccctggtcaattcactgcaaaaatgggtgctgaagggattaaagatttattagaa
gaaatcaacttagatgaagaattaaaaatgttacgtgatgaacttgaatctgctacaggt
caacgtttaacacgtgcgatcaaacgtttagaagttgtggaatcattccgtaattcaggc
aacaaccctgcatggatgattttagacgtacttccaattattccaccagaaattcgtcca
atggtgcaattagatggtggacgttttgcgacaagtgatttgaacgatttatatcgtcgt
gtcattaaccgtaacaaccgtttaaaacgtttattagaccttggtgcacctggcatcatc
gttcaaaacgaaaaacgtatgttacaagaagctgttgatgcattaatcgataacggtcgc
cgtggtcgtcctgttacaggtcctggtaaccgtccattaaaatcactctcgcatatgtta
aaaggtaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgttgactattctggt
cgttcggttatcgcggtaggtccgaacttaaaaatgtaccaatgtggtttacctaaagaa
atggcgttagaattattcaaacctttcgtaatgaaagaattagttcaacgtgaaattgct
acaaacattaaaaatgcgaaaacgaaaattgaacgtacggaagatgaagtttgggacgtt
ttagaagatgtcatcactgaacacccagtacttcttaaccgtgcccctacgcttcacaga
ttaggtatccaagcgttcgaaccaacgcttgtagaaggacgtgcgattcgtctacaccca
cttgtaacgacagcttacaatgcggactttgacggtgaccaaatggccgttcacgtacct
ttatcaaaagaagcacaagcagaagcgcgtatgttaatgcttgcggcgcaaaacatcttg
aaccctaaagacggtaaaccagttgtaacaccatctcaggatatggtacttggtaactac
tacctaactttagaacgtaaagatgcggtaaatacaggtttattatttaacgatgccaat
gaagtaatcaaagcgtatgcaaatggctatgtacatcttcatacacgtattggtgttcaa
gcagcatcattcaataacccaacatttactgaagaacaaaaccgtaagattttaacaaca
tctgtaggtaaagtgattttcaatgaaatcattccagattcatttgcatatatcaatgag
ccaactgcgacaaacttagagaagaacacaccagataaatactttgttgatgcgtctgat
cttggtgaaggcggtttagcggaatactttgaaaacactgaacttgttccaccattcaac
aaaaaattcttaggtaacatcatcgcagaagtattcaatcgtttcagcattacagatacg
tctatgatgcttgacttaatgaaagacttaggatttaagtattcatctaaagcaggtatt
actgtaggtgttgctgacatcgtggtattaccagacaagaaagaaattcttgatgaatca
gaaaaacttgttgaacgcgtacaaaaacaatttaaccgtggtttattaactgaagaagag
cgctataatgcggttattgaaatttggacaaatgcaaaagaccaaattcaagaagagtta
atgcaatcacttgaaaaaacaaacccaatctttatgatgagtgactctggtgcccgtggt
aacgcatctaactttacgcaacttgcaggtatgcgtggattaatggccgcaccatcaggt
aaaatcatcgaacttccaatcacatcatcattccgtgaaggtttaaccgtattagagtac
ttcatctctactcacggtgcgcgtaaaggtcttgccgatacagcccttaaaacagcggac
tcaggttaccttactcgtcgtcttgttgacgtggcacaagatgttatcgtgcgtgaagaa
gactgtggtacagaccgtggtttactcgtttcagatatcaaagaaggtactgaaatgatc
gaaccatttatcgagcgtatcgaaggtcgttatgctaaagaaacgattcgtcacccagag
acagataaagttattatccgtccagacgaattaatcacaccagatattgcgaaagaaatt
acagatgcgggcatcgaagagatgtacatccgctcagcatttacatgtaacacacgtcac
ggtgtatgtgaaaaatgttatggtaaaaacttagcaactggtgaaaaagttgaagttggt
gaagcagtgggtacaatcgctgcacaatctatcggtgaacctggtacacagttaacaatg
cgtactttccatactggtggggtagccggtagcgatatcacacaaggtttaccacgtatc
caagagatttttgaagcgcgtaacccgaaaggtcaagccgtgattacagaaatcgaaggt
acaattgataacattacaattggtaaagatagacaacaagaaatcgtggttaaaggtgcg
aacgaaacacgttcatacctcgcgccaggtacgtcacgcttgaaagttgaaatcggacaa
gcagttgaacgtggtgaagtgttaacagaaggttctatagagccgaaaaacttcttagca
attgcaggtcttactgcaactgaagcctacttgctaaaagaagttcaaaaagtttaccgt
atgcaaggggtagaaatcgacgacaaacacgttgaagttatggttcgtcaaatgttacgt
aaagttcgcattatcgaagctggtgacacgaaattattaccaggttcattagtggatatc
caccactttacagatgcgaaccgtgaagcatttaaagaacgtaaacgtccagcaacggct
aaaccagtacttttaggtatcacaaaagcatcacttgaaacagaaagtttcttatctgcg
gcatcattccaagaaacaacgcgtgtacttactgacgctgcgattaaaggtaaacgtgat
gacttacttggtcttaaagaaaacgttattatcggtaagctgattccagcgggtacaggt
atgaaacgttatagccaagtagatatcgaaaaagaaaaatcaacgattgacgcacaagaa
cacattgtgacggaataa
DBGET
integrated database retrieval system
