Streptococcus agalactiae ILRI112: SAIL_13250
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Entry
SAIL_13250 CDS
T02705
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sagr
Streptococcus agalactiae ILRI112
Pathway
sagr03410
Base excision repair
sagr03430
Mismatch repair
sagr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAIL_13250
03430 Mismatch repair
SAIL_13250
03440 Homologous recombination
SAIL_13250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagr03400
]
SAIL_13250
DNA repair and recombination proteins [BR:
sagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SAIL_13250
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAIL_13250
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAIL_13250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
CCW42339
LinkDB
All DBs
Position
complement(1236125..1238323)
Genome browser
AA seq
732 aa
AA seq
DB search
MISAKYSWVLNNQKPDAGFFEASKKEKISEAVASLIYSRGIKTSAELHHFLQTNLENLHD
PYLLNDMDKAVNRIRRAIENNETILVYGDYDADGMTSASIMKEALDMMGAEVQVYLPNRF
TDGYGPNESVYKYFIEQQGVSLIITVDNGVAGHEAIAYAQNQGVDVVVTDHHSMPADLPC
AYAIIHPEHPDANYPFPYLAGCGVAFKVACALLETIPTEMLDLVAIGTIADMVSLTDENR
IMVKAGLEVMKDSERIGLQELISLSNIDLKTLNEETIGFKIAPQLNALGRLDDPNPAIEL
LTGFDDEESQAIAQMIDQKNEERKEIVQTIFDQAMQMLDQTKPVQVLAKENWHPGVLGIV
AGRILERTGQPVIVLNIEDGIAKGSARSVEALDIFQAFDQHRELFIAFGGHSGAAGMTLE
ESKVGDLSQVLCDYISKKQLDMGQKKTLTIDSELRFDELSLDTVRDFEKLAPFGMDNKKP
VFLLKDFKVSQARVMGQNGAHLKLKLEQDGQALDLVAFNMGSQLQEFQQAQHLELAVTLS
VNQWNGATTLQLMLEDARVDGIQLFDIRSKASSLPHGVPILSQEEQSKEVILLTVPDHPQ
ELKQMTQGKQFDAIYFKNEIPKNYFISGYGTRDQFASLYKTIYQFPEFDVRYKLKELSSY
LHIPDILLIKMIQIFEELHFVTITEGIMTVNKEAEKRDISESQIYQELKETVKFQELMAL
GTPKEIYDFMMS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatatctgctaagtatagttgggtcctcaataaccaaaagccagacgctggctttttt
gaggcttcaaaaaaagaaaagataagtgaagcggtggcttccttaatttattcgcgaggt
attaagacatcagcggaattacatcattttttacaaactaatttggaaaatctccatgat
ccttatttgttaaatgatatggataaagctgttaatcgtattagacgagctattgaaaat
aatgaaactattttagtttatggagactatgatgctgatggaatgacatcagcatcaatc
atgaaagaagctttagatatgatgggagctgaagtccaggtttatctcccaaatcgcttt
acagatggttacggtcccaatgaaagtgtttataaatattttattgaacaacaaggtgtt
tcattaatcattacggttgataatggtgtggcggggcatgaagcaattgcatatgctcaa
aatcaaggtgtggacgtggtagttactgatcatcacagtatgccagcagatttaccttgt
gcttatgctattattcacccagaacatcctgatgctaattatccatttccttatttagca
gggtgtggtgttgcttttaaagtagcttgtgctctcttagaaacaatcccgacagaaatg
ttggatttggttgctattgggacgattgcagatatggttagcctaactgatgaaaatcgt
atcatggtaaaagctggacttgaagttatgaaagatagtgaaagaataggcttacaggag
ctaatatctttatcaaatattgatttaaaaacactaaatgaagaaactattggatttaaa
attgctccacaattaaacgctttaggaagacttgatgaccctaatccagctattgaatta
ctgacagggtttgatgatgaagaatctcaagcaatagcccaaatgattgatcaaaaaaat
gaagagcgcaaagaaatcgttcaaactatctttgaccaagctatgcaaatgcttgatcaa
acaaagcctgtacaagttttagcaaaagaaaattggcatccaggggttttaggtattgtg
gcgggtcgtattttagagagaactggacaacctgttattgttttgaatattgaagatggt
attgctaaaggaagtgccagaagtgtagaagcacttgatatttttcaagcttttgaccag
catcgagaattattcattgcttttggaggtcacagcggagcagcaggcatgactttagag
gaaagtaaggtgggggatctttctcaagttttatgtgactatatctctaaaaaacaattg
gacatgggtcagaaaaaaactctgacaattgatagtgagctacgttttgacgaacttagt
ttagacactgttagagattttgaaaagttagcgccatttggaatggataataaaaagcca
gtctttttgttaaaagattttaaagtgagtcaagctagagtcatggggcaaaacggtgct
catctgaaattaaaactagaacaagatggacaagcacttgatttggtagcatttaatatg
gggagtcaactacaagagttccaacaagcacaacatttggagttagctgtcactttatct
gttaatcaatggaatggtgccacaaccctacaattaatgttggaggatgcgcgtgtagat
ggtattcaattatttgatattagaagcaaagcaagtagcttacctcatggagtgccaatc
ctatctcaagaagagcagagcaaagaagttattcttttgactgttcccgatcatccacaa
gaattaaaacaaatgactcaaggtaaacagtttgatgccatctattttaaaaatgagata
ccaaaaaattattttatatctggttatggtacacgtgatcagtttgctagtttatataaa
acaatatatcaattcccagaatttgacgttcgttataagttaaaagagctcagttcctac
cttcatattcctgatattttattaattaaaatgattcaaatttttgaagaactacatttt
gttacgattacagaagggattatgacagtcaataaagaagcagaaaagcgagatatctct
gagagtcaaatttatcaagaattaaaagagacagttaagtttcaagaattaatggcttta
gggacacctaaagaaatatatgattttatgatgagttga
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