Streptococcus agalactiae ILRI112: SAIL_2300
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Entry
SAIL_2300 CDS
T02705
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sagr
Streptococcus agalactiae ILRI112
Pathway
sagr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sagr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAIL_2300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sagr03021
]
SAIL_2300
03400 DNA repair and recombination proteins [BR:
sagr03400
]
SAIL_2300
Enzymes [BR:
sagr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAIL_2300
Transcription machinery [BR:
sagr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAIL_2300
DNA repair and recombination proteins [BR:
sagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAIL_2300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CCW41279
LinkDB
All DBs
Position
185806..189429
Genome browser
AA seq
1207 aa
AA seq
DB search
MQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWECACGKYKRIR
YKGIICDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDMSPRALEEVI
YFAAYVVIDPMDTPLEPKSLLTEREYREKLQEYGYGSFVAKMGAEAIQDLLKRVDLDAEI
AVLKEELKSATGQKRVKAVRRLDVLDAFKKSGNKPEWMVLNILPVIPPDLRPMVQLDGGR
FAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNGRRGRPITGP
GSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPREMAIELFKP
FVMREIVARDLAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLHRLGIQAFEP
VLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHILNPKDGKPV
VTPSQDMVLGNYYLTMEDAGREGEGMIFKDHDEAVMAYQNGYVHLHTRVGIAVDSMPNKP
WTEEQKHKIMVTTVGKILFNDIMPEDLPYLIEPNNANLTEKTPDKYFLEPGQDIQAVIDN
LEINIPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVGIADIPVIDN
KAEIIDAAHHRVEDINKAFRRGLMTEEDRYVAVTTTWREAKEALEKRLIETQDPKNPIVM
MMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMT
DTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLTITAITDGKEVTETLEERLIGRYT
KKSIKHPETGEILVGADTLITEDMAAKVVKAGVEEVTIRSVFTCNTRHGVCRHCYGINLA
TGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQEIFEARNPKG
EAVITEVKGEVVAIEEDSSTRTKKVFVKGQTGEGEYVVPFTARMKVEVGDEVARGAALTE
GSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRKVRVMDPGDT
DLLPGTLMDISDFTDANKDIVISGGIPATSRPVLMGITKASLETNSFLSAASFQETTRVL
TDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPLAVNEVEIIEGTPVDAEVTEV
STPTTED
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacattagcatcaccaagtaaggtccgttcatggtcttatggtgaagttaaa
aaacctgaaacaatcaactaccgcacattgaaaccagaacgtgaaggactttttgatgaa
gttatttttggtccaacaaaagattgggaatgtgcgtgtggaaaatacaaacgtattcgt
tacaaaggaatcatttgtgaccgttgtggcgttgaagtaactcgtgcaaaagttcgtcgc
gaacgtatgggacatatcgagttaaaagcaccagtatctcatatctggtatttcaaaggt
atcccatcgcgtatggggctcacattggatatgagtcctcgtgcacttgaagaagttatt
tattttgcggcttatgttgttatcgatccaatggacacaccattagaaccgaagtcactc
cttactgagcgtgaataccgtgaaaaacttcaagagtacggttacggttcgtttgttgct
aaaatgggtgctgaagccattcaagatcttcttaaacgcgttgatttagatgcagaaatc
gcagttcttaaagaggagttgaaatcagcgacaggtcaaaaacgtgtgaaagcagttcgt
cgtctggatgtgttagatgcctttaaaaaatctggaaataaaccagaatggatggttctt
aacattttaccggttatcccaccggatcttcgtccgatggttcaattagatggtggtcgt
tttgcggcatcagacttgaatgacctttaccgccgtgttattaaccgtaacaatcgtttg
gcacgtttgttggaattaaatgctcctggcatcatcgttcaaaatgaaaaacgtatgtta
caagaagctgttgatgcgcttatcgacaatggtcgtcgtggtcgtccaattaccggacca
ggtagtcgtcctttgaaatcattaagccatatgcttaaaggtaaacaaggtcgtttccgc
caaaacttgcttggtaaacgtgttgacttctctggacgttccgttattgctgttggtcca
acacttaaaatgtaccaatgtggtgtaccacgtgaaatggctattgagctcttcaaacct
tttgtaatgcgtgaaatcgttgctcgtgacctcgcagggaacgttaaagcagctaaacgt
atggttgaacgtggggacgaacgaatttgggacatcttagaagaagttattaaagagcac
ccagtacttctaaaccgagcacctactcttcacagattaggtatccaagcgtttgaacct
gtccttattgatggtaaggcgcttcgtcttcacccacttgtatgtgaggcctacaatgct
gactttgatggagaccaaatggccatccacgttccattgtctgaagaagcccaagcagaa
gctcgtcttttgatgcttgctgcagagcacatccttaaccctaaagatggtaagccagtc
gtaacaccatctcaggacatggttttaggaaattactacctgactatggaagatgctggt
cgtgaaggtgaaggcatgattttcaaagatcatgacgaagcagttatggcatatcaaaat
ggttatgttcatttacatacacgtgttggtatcgctgttgattcaatgccgaataagcct
tggacagaagagcaaaaacataaaatcatggttacaacagttggtaagattctcttcaac
gatatcatgcctgaagatttaccgtacttaattgaacctaataatgcaaacttgacagaa
aaaactccagataaatacttcttagagccaggtcaggatattcaagcagttattgataac
ttagagattaatattccctttaagaagaaaaatcttggtaatattatcgcagaaactttc
aaacgtttccgtacaacagaaacttctgctttccttgaccgtttgaaggatcttggatat
tatcattcaacacttgctggtttaactgtgggtattgctgatatcccagttattgacaat
aaagctgagattattgatgcagctcaccacagagttgaagatatcaataaagccttccgt
cgaggtttgatgactgaagaagatcgttatgttgctgttacaacaacatggcgtgaagct
aaagaagcacttgaaaaacgtcttattgagacacaagatccaaagaaccctatcgttatg
atgatggactcaggagctcgtggtaacatctcaaacttctcacaacttgccggtatgcgt
ggtttgatggctgctcctaacggacgtatcatggaattgccaatcttatcaaacttccgt
gaaggtcttagtgttttggaaatgttcttctcaactcacggtgcgcgtaaaggtatgact
gatacggcccttaagacagccgactcaggttaccttactcgtcgtttggttgacgttgcc
caagatgttattattcgtgaagatgactgtggaacagaccgcggtttgacaatcacagca
attacagatggtaaagaggttactgagacacttgaagagcgtttgataggacgttatact
aagaagtcaatcaaacatcctgagacaggtgaaattctcgttggtgcggataccttaatt
actgaagatatggctgctaaagttgttaaagccggcgttgaggaagtaactatccgatca
gtatttacatgtaacactcgccatggtgtttgtcgtcactgttacggtattaacttggca
acaggtgatgctgttgaggttggtgaagcagttggtactattgcagctcaatctatcggt
gaaccagggacacagcttacaatgcgtaccttccataccggtggtgttgcttcaaatact
gatattacacaaggtctcccacgtatccaagaaatctttgaagcacgtaaccctaaaggt
gaggcagttattactgaagttaagggtgaagtcgttgcaattgaagaagactcttcaaca
cgtactaagaaagtattcgttaaaggtcagacaggtgagggagaatacgttgttccattt
acagcacgtatgaaagttgaagttggtgatgaagtagctcgtggtgcggccttaactgaa
ggatctatccaaccaaaacgtctccttgaagttcgtgatactttatctgttgaaacgtac
ctacttgctgaagtacaaaaagtttaccgtagccaaggggtagaaatcggagataaacac
gttgaggtaatggttcgtcaaatgctccgtaaagttcgtgtcatggatccaggagataca
gatcttcttccaggtacacttatggatatttcagactttacagatgctaacaaagatatt
gttatttccggtggtatccctgcgacaagccgtcctgtccttatgggtattactaaggct
tcccttgaaactaattcattcttatcagctgcatccttccaagaaacaacacgtgttctt
acagatgctgctatccgtggtaagaaagatcacttacttggtcttaaagaaaatgttatt
atcggtaaaatcattccagcgggtactggtatggctcgttaccgtaatattgaaccactt
gctgttaatgaagttgagattattgaaggaactcctgttgatgcagaagttacggaagta
tcaacacctacaacagaagattaa
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integrated database retrieval system
