Streptococcus agalactiae ILRI112: SAIL_3600
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Entry
SAIL_3600 CDS
T02705
Name
(GenBank) ATP-dependent RNA helicase YqfR
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sagr
Streptococcus agalactiae ILRI112
Brite
KEGG Orthology (KO) [BR:
sagr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagr03019
]
SAIL_3600
03009 Ribosome biogenesis [BR:
sagr03009
]
SAIL_3600
Enzymes [BR:
sagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAIL_3600
Messenger RNA biogenesis [BR:
sagr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAIL_3600
Ribosome biogenesis [BR:
sagr03009
]
Prokaryotic type
rRNA helicases
SAIL_3600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Helicase_RecD
SWI2_SNF2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
CCW41393
LinkDB
All DBs
Position
291604..292866
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AA seq
420 aa
AA seq
DB search
MSFKDFNFKPYIQRALDELKFVDPTDVQAKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF
EKLDESSNDVQVVITAPSRELATQIYQATKQIAEHSEQEVRVVNYVGGTDKLRQIEKLKV
SQPHIVIGTPGRIYDLVKSGDLAIHKAHTFVVDEADMTLDMGFLDTVDKIAGSLPKDVQI
LVFSATIPQKLQPFLKKYLTNPVMEKIKTATVIADTIDNWLLSTKGRDKNAQILELSKLM
QPYLAMIFVNTKERADELHSYLSSNGLKVAKIHGGIAPRERKRIMNQVKNLEFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKL
GINFIPKVIKNGEFQDTYDRDRRNNREKSYQKLDTEMIGLVKKKKKKIKPGYKKKNSMES
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattttaattttaaaccatacattcagagggctctcgatgagttaaaa
ttcgtcgatccaactgatgttcaagctaaattgattccagttgttcgttcaggccgcgat
cttgtgggggaatcgaaaactggttctggtaaaacccacacctttttacttcctattttt
gagaagctagatgaaagtagtaatgatgttcaagttgttattactgcaccaagtagagag
ttggcaacacaaatttatcaggcaactaaacaaattgctgagcattcagagcaagaagta
cgggtggttaactatgttggtggtactgacaaattacgtcaaattgaaaagttgaaagta
agccaacctcatattgtcattggaaccccaggacgtatttatgatttggtgaagtcaggt
gatttagctattcataaggcgcatacttttgttgttgatgaagcagatatgactctagat
atgggattccttgataccgttgataagattgcagggtctttacccaaggatgtccaaatt
ttagtcttttcagcaacgattccacaaaaattacagccatttttaaagaaatatttgacc
aatcctgtaatggaaaaaatcaaaacagcaacagttatcgctgataccatcgataactgg
cttttgtccactaaaggacgtgataaaaatgcacaaattttggaactctctaaactaatg
cagccttaccttgcaatgatatttgttaatacgaaagagcgtgcagacgaattacactcg
tatctttctagtaatggcttaaaagtagctaaaattcatggtgggattgcacctcgtgaa
cgtaaacgtattatgaatcaggttaaaaacctcgaatttgaatatatcgttgcaacagat
ttagcagcgcgtggtattgatattgaaggtgttagccatgttatcaatgatgccatccct
caagacctatctttctttgtccaccgtgtcggtcgcacaggccgtaatggcttatctggt
actgctataactttatatcagccaagtgacgattctgatattcgtgaacttgaaaaacta
ggtattaattttattcccaaagtcattaaaaacggtgaatttcaagatacatacgaccgt
gatcgtcgtaataaccgtgaaaagtcctatcaaaaattagatacagaaatgattggactt
gtgaaaaagaaaaagaaaaaaataaaaccaggttacaagaaaaaaaattcaatggaaagt
tga
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