Streptococcus agalactiae SA20: SaSA20_0196
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Entry
SaSA20_0196 CDS
T02338
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sags
Streptococcus agalactiae SA20
Pathway
sags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SaSA20_0196 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sags03019
]
SaSA20_0196 (pnp)
03016 Transfer RNA biogenesis [BR:
sags03016
]
SaSA20_0196 (pnp)
Enzymes [BR:
sags01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SaSA20_0196 (pnp)
Messenger RNA biogenesis [BR:
sags03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SaSA20_0196 (pnp)
Transfer RNA biogenesis [BR:
sags03016
]
Prokaryotic type
tRNA degradation factors
SaSA20_0196 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AFV71685
LinkDB
All DBs
Position
297111..299240
Genome browser
AA seq
709 aa
AA seq
DB search
MSKQVFEMIFAGKKLVVETGQVAKQANGSVVVRYGDSTVLTAAVMSKKMSTGDFFPLQVN
YEEKMYAAGKFPGGFNKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSFDE
NASAPMAAMFGSSLALSISDIPFNGPIAGVQVASVDGNFIINPTAQEQEASALELTVAGT
KEAINMVESGAKELSEEIMLEALLKGHEAVCELIAFQEEIVTAIGKEKAEVELLQVDPEL
QAEIIATHNIALQAAVQVEEKKAREAATEAVKEVVIGEYEARYAEHEEYDRIMRDVAEIL
EQMEHAEVRRLITEDKIRPDGRRVDEIRPLDAEIDFLPQVHGSGLFTRGQTQALSVLTLA
PMGEAQIIDGLTPEYKKRFMHHYNFPQYSVGETGRYGAAGRREIGHGALGERALEQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIEGITPQILEEALAQAKKARFEILDVL
HGAIAEPRPQLAPTAPKIDMIKIDVDKIKVVIGKGGETIDKIIAETGVKIDIDEEGNVSI
FFSDQAAIDRTKDIIASLVREAKVGEVYHAKVVRIEKFGAFVNLFDKTDALVHISEIAWT
RTANVADVLEIGEEVDVKVIKIDDKGRVDGSMKALLPRPPKADNPKKES
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaagtctttgaaatgatttttgctggtaaaaaattagttgttgaaactggg
caagtggctaaacaagcaaatggatcagttgtcgttcgttatggagattctactgtactc
acagcagcagttatgtctaagaaaatgtcaacaggtgattttttcccacttcaagtcaat
tacgaagaaaaaatgtatgctgctgggaaatttccgggtggctttaacaaacgtgaaggg
cgtccaagtacggatgctaccttaacagcacgtcttattgatagaccaatccgtccgatg
tttgctgagggatttcgtaacgaagtacaggtcatcaatactgttctttcatttgatgaa
aatgctagcgcaccaatggctgctatgtttggttcatcattagcattatcgatttccgat
attcctttcaatgggccaattgctggagttcaagttgcttctgttgatggtaattttatt
attaatccgacagcacaagaacaagaggcttctgcgttagaattaacggttgcaggtact
aaagaagcgattaacatggttgaatctggagcgaaagaactttcagaagaaatcatgcta
gaggctcttcttaaaggacatgaggctgtctgtgaattaatcgcctttcaagaagagatt
gttactgctattggtaaagaaaaagccgaggtagaacttcttcaagttgatccagaactt
caagcagaaattattgctactcataacatagctttacaggctgcagtacaagttgaagag
aaaaaggctagagaagcggctacagaagcagttaaagaagtagttataggtgaatatgag
gcgcgttacgctgaacatgaagaatatgatcgcattatgcgtgatgttgctgaaatttta
gaacaaatggaacatgcagaagttcgtcgcctcattacagaagataagattcgtcctgat
ggacgtcgtgtggatgagattcgtccattagacgcagagattgattttttaccacaagtt
catggatcaggtctctttacacgaggacaaacccaagcattatcagtattaacgttagca
cctatgggtgaagcacaaatcattgatgggctaacaccagagtataagaaacgctttatg
caccactataacttcccacaatattcagttggtgagacgggacgttatggagctgcaggg
cgtcgtgaaattggtcacggtgctttaggagagcgtgcattagaacaagtccttccaagc
ttggaggagtttccgtatgctatccgactagttgcagaagttttagaatcaaacggttca
tcatctcaggcttctatatgtgctggaacgcttgctcttatggcaggtggtgtgcctata
aaagctccagttgctggtattgccatggggctcatatcagatggaacaaactatacagtc
ctcactgatattcaaggattagaagaccattttggcgatatggactttaaagttgcgggt
acacgtgaagggattacagcacttcaaatggatattaaaattgaaggtattacccctcaa
attttggaagaagctcttgcgcaagctaaaaaagcacgctttgaaattcttgatgtcctt
catggagctatcgcagagccacgtccacaattagcaccaacggcacctaagattgatatg
ataaaaatcgatgttgataagattaaagttgtcatcggtaaaggtggcgaaactatcgat
aaaatcatcgctgaaacaggtgttaagattgatattgatgaagaaggaaatgtatctatc
ttctttagtgatcaggctgctattgatcgtacgaaagacattattgcaagtttagtacgt
gaagcaaaagtgggagaagtttaccatgctaaagtagttcgtatcgagaaattcggtgcc
tttgtcaacctctttgataaaacagatgcattggtacatatttcagaaattgcatggaca
cgtacagcaaatgtagctgatgttcttgaaattggtgaagaagttgatgtgaaagtcatc
aaaattgatgataaagggcgagttgatggctctatgaaagcattgttaccacgtcctcca
aaagctgacaatcctaaaaaggaatcttaa
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