Streptococcus agalactiae SA20: SaSA20_0261
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Entry
SaSA20_0261 CDS
T02338
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sags
Streptococcus agalactiae SA20
Brite
KEGG Orthology (KO) [BR:
sags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sags03019
]
SaSA20_0261
03009 Ribosome biogenesis [BR:
sags03009
]
SaSA20_0261
Enzymes [BR:
sags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SaSA20_0261
Messenger RNA biogenesis [BR:
sags03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SaSA20_0261
Ribosome biogenesis [BR:
sags03009
]
Prokaryotic type
rRNA helicases
SaSA20_0261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AFV71749
LinkDB
All DBs
Position
60788..62131
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AA seq
447 aa
AA seq
DB search
MSFKDFNFKPYIQRALDELKFVDPTDVQAKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF
EKLDESSDDVQVVITAPSRELATQIYQATKQIAEHSEQEVRVVNYVGGTDKLRQIEKLKV
SQPHIVIGTPGRIYDLVKSGDLAIHKAHTFVVDEADMTLDMGFLDTVDKIAGSLPKDVQI
LVFSATIPQKLQPFLKKYLTNPVMEKIKTATVIADTIDNWLLSTKGRDKNAQILELSKLM
QPYLAMIFVNTKERADELHSYLSSNGLKVAKIHGGIAPRERKRIMNQVKNLEFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKL
GINFIPKVIKNGEFQDTYDRDRRNNREKSYQKLDTEMIGLVKKKKKKIKPGYKKKIQWKV
DEKRRKERRASNRAKGRAERKAKKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattttaattttaaaccatacattcagagggctcttgatgagttaaaa
ttcgtcgatccaactgatgttcaagctaaattgattccagttgttcgttcaggccgcgat
cttgtgggggaatcgaaaactggttctggtaaaacccacacctttttacttcctattttt
gagaagctagatgaaagtagtgatgatgttcaagttgttattactgcaccaagtagagag
ttggcaacacaaatttatcaggcaactaaacaaattgctgagcattcagagcaagaagta
cgggtggttaactatgttggtggtactgacaaattacgtcaaattgaaaagttgaaagta
agccaacctcatattgtcattggaaccccaggacgtatttatgatttggtgaagtcaggt
gatttagctattcataaggcgcatacttttgttgttgatgaagcagatatgactctagat
atgggattccttgataccgttgataagattgcagggtctttacccaaggatgtccaaatt
ttagtcttttcagcaacgattccacaaaaattacagccatttttaaagaaatatttgacc
aatcctgtaatggaaaaaatcaaaacagcaacagttatcgctgataccatcgataactgg
cttttgtccactaaaggacgtgataaaaatgcacaaattttggaactctctaaactaatg
cagccctatcttgcaatgatatttgttaatacgaaagagcgtgcagacgaattacactcg
tacctttctagtaatggcttaaaagtagctaaaattcatggtgggattgcacctcgtgaa
cgtaaacgtattatgaatcaggttaaaaacctcgaatttgaatatattgttgcaacagat
ttagcagcgcgtggtattgatattgaaggtgttagccatgttatcaatgatgccatccct
caagacctatctttctttgtccaccgtgtaggtcgcacaggtcgcaatggcttatctggt
actgctataactttatatcagccaagtgacgattctgatattcgtgaacttgaaaaacta
ggtattaattttattcctaaagtcattaaaaacggtgaatttcaagatacatacgaccgt
gatcgtcgtaataaccgtgaaaagtcctatcaaaaattagatacagaaatgattggactt
gtgaaaaagaaaaagaaaaaaataaaaccaggttacaagaaaaaaattcaatggaaagtt
gatgaaaagcgtcgcaaagagcgtagagcaagtaatcgtgctaaggggcgtgcggagcgc
aaagctaaaaaacaaagtttttaa
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