Streptococcus agalactiae SA20: SaSA20_0788
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Entry
SaSA20_0788 CDS
T02338
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sags
Streptococcus agalactiae SA20
Pathway
sags03030
DNA replication
sags03430
Mismatch repair
sags03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sags00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SaSA20_0788 (dnaE)
03430 Mismatch repair
SaSA20_0788 (dnaE)
03440 Homologous recombination
SaSA20_0788 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sags03032
]
SaSA20_0788 (dnaE)
03400 DNA repair and recombination proteins [BR:
sags03400
]
SaSA20_0788 (dnaE)
Enzymes [BR:
sags01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SaSA20_0788 (dnaE)
DNA replication proteins [BR:
sags03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SaSA20_0788 (dnaE)
DNA repair and recombination proteins [BR:
sags03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SaSA20_0788 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1PC
Motif
Other DBs
NCBI-ProteinID:
AFV72251
LinkDB
All DBs
Position
832842..835946
Genome browser
AA seq
1034 aa
AA seq
DB search
MFAQLDTRTVYSFMDSLVDLKTYVSKSKSLGYQTIGILDHSNLYAAYHFIQEAQKANLRP
IVGFSFDIVVENRSIEVYCIAINTVGYKNLLKLSTAQMSEKMSLNLLTEHLEGVQLILPY
QDALDQLNLPFDYVIGVNLTSPQIPYTKPIIAIDTVRYFQKNDIETLQMLHAIRDNVLLK
DAQYASKNQELKPCQEMTLAFKERFPEALANLESLVENVAYHFDSDFKLPIFNREIPAGE
ELRTLTQNNLKSKGLWSNAYQERLEKELTIIHKMGFDDYFLIVWDLLRFGRSKGYYMGMG
RGSAAGSLVSYALNITGIDPVKHNLIFERFLNEERYSMPDIDIDLPDIYRGEFLRYVRNR
YGSMHSAQIVTFSTFGAKQAIRDVFKRFGASEYELTNITKKIHFRDNLTSVYNRNLAFRQ
IIDSKIEYQKAYDIAKRIEGNPRQTSIHAAGVVMSDDLLTDHIPLKNGEDMMITQYDAGS
VEANGLLKMDFLGLRNLTFVQKMKEKVDKDYGISIQLEAIDLEDKETLKLFAAGQTKGIF
QFEQSGAINLLRRIRPECFEDVVATTSLNRPGASDYTENFINRRFGKEKIDLVDPVIAPI
LQPTYGIMLYQEQVMQIAQTYAGFTLGKSDLLRRAMSKKNSKEMQKMSQSFLEGAVSKGH
RQEDARLIFERMAKFAGYGFNRSHAFAYSALAFQLSYFKAHYSDVFYDIMINYSNSDYLI
DAIDFGFVIEKPSINTISYRDRIYKKKIYLGLKNIKGVPNDLAYWISKNQPFQSIEDFLM
RLPQQFQKSGFISPLIAIGAFDEFDNNRRKITSNLDSLFTFVNELGSLFADTSYHWLEVE
DFSNSEKYEMEQDILGVGISPHPLVGISQKASRPFIPISQVQENSEATILVQLKQVKVIR
TKSSGQQMAFLTVMDINSKMDITVFPETFNIVRDDLQEGKYYYLHGKIQKRDERLQMVLN
GVQEATEERFWILLKNHDNDKKISEILSKYKGHIPVYLHYETTKETIQSKVHLVRKDSGL
ALDLSEFVVKTVYQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacaacttgatacaagaaccgtctattcttttatggatagcttggttgattta
aagacatatgtctctaaatcgaaatcattaggatatcaaactattggtatcttggaccac
agtaatctttatgcagcgtatcattttattcaagaggcgcaaaaggcaaacctaagacca
atagttggatttagctttgatatagtggttgaaaatagatcaatagaagtttactgtatt
gcgataaatacagttggttataagaatctcttgaagttgtcaacggctcaaatgtctgag
aagatgtctctaaatttattaacagaacatcttgaaggggtgcaattgattcttccctat
caagatgctcttgatcagctcaatttaccctttgattatgttattggtgttaatttgacc
tctccgcagattccatataccaaacccattatagccatagatactgttcgatattttcaa
aaaaatgatattgagacattacagatgcttcatgctataagagataatgtcctgttaaaa
gacgcacaatatgcgagcaaaaatcaagaattaaaaccttgtcaagaaatgactctagca
ttcaaggaacgttttcctgaagctttagctaacctagaatctttggtagagaatgttgct
tatcactttgattctgactttaagttacctatttttaatagagaaattcctgctggagaa
gaattaagaaccttaactcaaaataacttaaaaagtaaaggtttatggagcaatgcttat
caagagcgtctcgaaaaagaattaacaatcattcacaaaatgggctttgatgactatttt
cttattgtgtgggatttattaagatttggtcgtagtaaaggctactatatgggaatggga
cgtggttcagcagcgggaagtttagtctcatatgctttaaatattaccggtatcgatcct
gtcaaacataatttaatttttgaacgttttttaaatgaagagcgttattcgatgccagat
attgatattgatcttccggatatttatcgtggagaattcttgcgctatgtacgtaatcga
tatggttcaatgcattctgcacagattgtaaccttctcaacttttggtgcgaaacaggct
attcgagatgtttttaaacgctttggtgcatcagagtatgagttaacaaacataactaaa
aaaattcatttcagagataatttgaccagtgtttataaccgtaacttagctttcagacaa
ataatagatagtaaaattgaataccaaaaagcctatgatattgctaagcgtattgaagga
aatcctagacagacttctattcatgccgctggggtagtaatgagtgacgatttgttaaca
gatcatattcctttaaaaaacggtgaggatatgatgataacgcaatatgatgctggttct
gttgaggctaatggtcttctaaaaatggactttctaggtcttcgaaatttgacatttgtt
cagaaaatgaaggagaaagttgataaggactacggtatctctatacaattagaagctatt
gatttagaagataaagagactctaaaactatttgcagctggtcaaacaaaggggattttt
caatttgagcaaagtggagctattaatttgttgcgacgtattaggccagagtgttttgaa
gatgtggtagctaccaccagcttgaataggcctggtgcaagtgattatactgagaatttt
ataaaccgtcgttttggtaaagaaaaaatcgatttagtagatcctgtcatagctccaatt
ttacaacctacctatggcataatgctctatcaagaacaggttatgcagattgcccagacc
tacgcaggttttacgctaggcaagtctgatttgctcagacgtgctatgtctaagaaaaat
tctaaggagatgcaaaagatgtctcaatccttcttagagggtgcagtatctaagggacat
cgtcaagaagatgctcgacttatatttgaacgcatggctaaatttgcaggttatgggttt
aatcgcagccatgcctttgcttattcggctttagcttttcaattatcctatttcaaagcc
cattattccgatgtcttttatgacatcatgataaattattcaaatagtgattatctaatc
gatgctattgattttggttttgttattgaaaaaccttcaattaatactatttcatacaga
gaccgcatctataaaaagaaaatttacttaggtttaaaaaatattaagggtgttcctaac
gacttggcttattggatttctaaaaatcaaccgtttcagagtattgaagattttctaatg
agactgccacagcagtttcaaaaaagtggttttatttctccgctaattgctattggagca
tttgacgaatttgataacaatagacggaaaatcacctctaatctcgattctttatttaca
tttgtaaatgaactaggtagtttatttgcagatacctcatatcattggttagaagtagaa
gatttctctaattctgagaaatatgaaatggaacaagatatcttaggagtaggaatcagc
ccgcaccctttagtggggatttcacaaaaagctagccgtccgtttataccaattagtcaa
gtccaagaaaatagcgaagctactattttagttcagctaaagcaggtcaaagtcattagg
acaaaaagttctggacaacaaatggctttcttgactgttatggatattaattcaaaaatg
gatatcactgtttttcctgaaactttcaatattgtaagagatgatttacaagaagggaaa
tattattacttgcatggaaaaattcagaagcgagatgagcgattacagatggttttaaac
ggtgttcaagaagcaacggaggaacgtttttggatacttctaaaaaatcatgataacgac
aaaaaaatatcggaaatattgtccaaatataaagggcatattcctgtctatttgcattat
gaaacaactaaagaaactatccaaagcaaagtacatctggttagaaaagatagtggctta
gcccttgatttatctgaatttgttgtgaaaacggtttatcaataa
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