Streptococcus agalactiae SA20: SaSA20_1223
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Entry
SaSA20_1223 CDS
T02338
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sags
Streptococcus agalactiae SA20
Pathway
sags03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sags00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SaSA20_1223 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sags03400
]
SaSA20_1223 (mutM)
Enzymes [BR:
sags01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SaSA20_1223 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SaSA20_1223 (mutM)
DNA repair and recombination proteins [BR:
sags03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SaSA20_1223 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AFV72673
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All DBs
Position
complement(1289839..1290660)
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AA seq
273 aa
AA seq
DB search
MPELPEVETVRKGLERLVVNQEIASITIKVPKMVKTDLNDFMISLPGKAIQQVLRRGKYL
LFDFGEMVMVSHLRMEGKYLLFPNKVPDNKHFHLYFKLTNGSTLVYQDVRKFGTFELVRK
SSLKDYFTHKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGLGNIYVDEVLW
AAKIHPQRLANQLTESETSLLHKEIIRILTLGIEKGGSTIRTYKNALGEDGTMQKYLQVY
GKTGQPCPRCGCLIKKIKVGGRGTHYCPRCQCL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtagaaaccgttagaaaaggactagaaagacttgtagttaat
caagaaatagcttctataacgattaaagtccctaaaatggtgaaaactgatttgaatgac
ttcatgataagtctaccaggaaaagcaattcaacaggtattgagacgagggaagtatctt
ctttttgattttggtgaaatggttatggtatcacatttacgcatggaaggaaaatatcta
ctcttcccaaataaagtaccagataacaaacattttcacctttatttcaaattgactaat
ggtagtacattggtttatcaagatgtccgtaaatttgggacatttgagttggttcgtaaa
tcatctctcaaagattattttactcataaaaaattaggtcctgagccaactgctgacaca
tttcaatttgagcctttttcaaaaggcttagcaaactccaaaaagccaataaaaccttta
ctattagatcagagattagtagcaggacttggaaatatttatgtagatgaagtcttgtgg
gcagcaaaaattcacccacagcgtttggctaatcaattgaccgaatctgaaacaagctta
ttacacaaggaaattattcgcattttaactttaggcatcgaaaaaggtggctccacgatt
agaacatataagaatgctcttggagaggacggtacgatgcaaaagtatttacaggtctat
ggtaaaactgggcaaccatgtccaaggtgtggttgtttaattaagaagataaaagtagga
gggagagggacgcattattgccctaggtgtcaatgcttatga
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