Streptococcus agalactiae SA20: SaSA20_1468
Help
Entry
SaSA20_1468 CDS
T02338
Symbol
rnj_2
Name
(GenBank) Ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sags
Streptococcus agalactiae SA20
Pathway
sags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SaSA20_1468 (rnj_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sags03019
]
SaSA20_1468 (rnj_2)
Messenger RNA biogenesis [BR:
sags03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SaSA20_1468 (rnj_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AFV72909
UniProt:
A0AAW3HV27
LinkDB
All DBs
Position
1527211..1528890
Genome browser
AA seq
559 aa
AA seq
DB search
MSNINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVENIDRIKALVITHGHEDHIGGIPFLLKQANLPIYAGPLALALIKGKLEEHGLLRDAT
LYEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVGEPADL
HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGIEGRIIFASFASNIFRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG
KINNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGIPKENIFIMEN
GDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDSK
MILAGPDILSRGFIYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRPFL
YEKTEREPIIIPMVLTPDK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatcaacttaaaacccgaagaagttggggtttatgcgattggtggtctcggt
gaaatcggaaaaaatacttacggtatcgaatatcaagacgaaattattattgtagacgct
ggtattaaattccctgaagatgatcttttgggaatagattatgttatcccagactattca
tatatcgttgaaaacattgaccgtatcaaggcccttgttataactcatgggcatgaggac
cacatcggtggtattccttttctattaaaacaagctaatttaccgatttatgcaggccct
ctcgctcttgctctaatcaaaggtaagttagaagaacatggtttacttcgtgacgctaca
ttatacgaaatccacgctaatacagagctgacttttaaaaacttaagcgttacatttttc
cgcactactcactccattcctgaaccattaggtattgttattcatacccctcaaggtaag
gttatttgtacaggtgacttcaaatttgactttacacctgttggggagccagctgactta
catcgtatggctgctctaggtgaagatggtgtcctctgccttttatcagactcgacaaat
gctgaagttccaaccttcactaattccgaaaaaattgttgggcaatctattatgaagatt
atcgaaggtatcgagggacgtattattttcgcctcttttgcttcaaacatcttccgactc
caacaggctgctgaagctgctgttaaaactggtcgtaaaattgctgtttttggacggtca
atggaaaaggcaattgttaacggtattgaacttggctatattaaagttccaaaaggtacc
ttcattgagccaagcgaacttaaaaatcttcatgctagtgaagttttaattatgtgtaca
ggtagtcaaggtgagtctatggcagcacttgctcgtatcgctaatggtactcatcgtcaa
gttactttgcagcctggtgatactgtgattttctcatcaagcccaatccctggtaataca
acaagtgtcaataaattaatcaataccattcaagaagctggtgtcgatgttattcatggt
aaaattaacaatatccatacctccggccatggtggtcaacaagaacaaaaattaatgtta
cgcttgattaaaccaaagtatttcatgcccgtacacggtgagtatcgcatgcaaaaagtc
catgctggtttagcagttgacacaggtattcctaaagagaatatcttcattatggaaaac
ggtgatgttttagctttaacgagcgactctgctcgcattgctggacatttcaatgctcaa
gatatctacgttgatgggaatggtattggcgatattggtgcggcagttctacgtgaccgc
cacgacttatctgaagatggtgttgtccttgccgttgctaccgttgatttcgattcaaaa
atgattttagctggaccagacatccttagccgaggctttatctatatgagagaatctggg
gaccttattcgcgaaagccaacatatcttattcaatgctattcgtattgcactgaaaaat
aaagatgcaagtatccaatcagtaaatggagctattgttaatgccttacgcccattctta
tatgaaaaaactgagcgtgagcctatcattattcctatggtccttacccctgataaataa
DBGET
integrated database retrieval system
