Streptococcus agalactiae COH1: GBSCOH1_0272
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Entry
GBSCOH1_0272 CDS
T03434
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sagt
Streptococcus agalactiae COH1
Brite
KEGG Orthology (KO) [BR:
sagt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagt03019
]
GBSCOH1_0272
03009 Ribosome biogenesis [BR:
sagt03009
]
GBSCOH1_0272
Enzymes [BR:
sagt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GBSCOH1_0272
Messenger RNA biogenesis [BR:
sagt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GBSCOH1_0272
Ribosome biogenesis [BR:
sagt03009
]
Prokaryotic type
rRNA helicases
GBSCOH1_0272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
CDN65738
LinkDB
All DBs
Position
299904..301247
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AA seq
447 aa
AA seq
DB search
MSFKDFNFKPYIQRALDELKFVAPTDVQAKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF
EKLDESSDDVQVVITAPSRELATQIYQATKQIAEHSEQEIRVVNYVGGTDKLRQIEKLKV
SQPHIVIGTPGRIYDLVKSGDLVIHKAHTFVVDEADMTLDMGFLDTVDKIAGSLPKDVQI
LVFSATIPQKLQPFLKKYLTNPVMEKIKTATVIADTIDNWLLSTKGRDKNAQILELSKLM
QPYLAMIFVNTKERADELHSYLSSNGLKVAKIHGGIAPRERKRIMNQVKNLEFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKL
GINFIPKVIKNGEFQDTYDRDRRNNREKSYQKLDTEMIGLVKKKKKKIKPGYKKKIQWKV
EEKRRKERRASNRAKGRAERKAKKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattttaattttaaaccatacattcagagggctctcgatgagttaaaa
ttcgtcgctccaactgatgttcaagctaaattgattccagttgttcgttcaggccgcgat
cttgtgggggaatcgaaaactggttctggtaaaacccacacctttttacttcctattttt
gagaagctagatgaaagtagtgatgatgttcaagttgttattactgcaccaagtagagag
ttggcaacacaaatttatcaggcaactaaacaaattgctgagcattcagagcaagaaata
cgggtggttaactatgttggtggtactgacaaattacgtcaaattgaaaagttgaaagta
agccaacctcatattgtcattggaaccccaggacgtatttatgatttggtgaagtcaggt
gatttagttattcataaggcgcatacttttgtggttgatgaagcagatatgactctggat
atgggattccttgataccgttgataagattgcagggtctttacccaaggatgttcaaatt
ttagtcttttcagcaacgattccacaaaaattacagccatttttaaagaaatatttgacc
aatccagtaatggaaaaaatcaaaacagcaacagttatcgctgataccatcgataactgg
cttttgtccactaaaggacgtgataaaaatgcacaaattttggaactctctaaactaatg
cagccttaccttgcaatgatatttgttaatacgaaagagcgtgcagacgaattacactcg
tatctttctagtaatggcttaaaagtagctaaaattcatggtgggattgcacctcgtgaa
cgtaaacgtattatgaatcaggttaaaaacctcgaatttgaatatatcgttgcaacagat
ttagcagcgcgtggtattgatattgaaggtgttagccatgttatcaatgatgccatccct
caagacctatctttctttgtccaccgtgtcggtcgcacaggccgtaatggcttatctggt
actgctataactttatatcagccaagtgacgattctgatattcgtgaacttgaaaaacta
ggtattaattttattcctaaagtcattaaaaacggtgaatttcaagatacatacgaccgt
gatcgtcgtaataaccgtgaaaagtcctatcaaaaattagatacagaaatgattggactt
gtgaaaaagaaaaagaaaaaaataaaaccaggttacaagaaaaaaattcaatggaaagtt
gaagaaaagcgtcgcaaagagcgtagagcaagtaatcgtgctaaggggcgtgcggagcgc
aaagctaaaaaacaaagtttttaa
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