Streptococcus agalactiae COH1: GBSCOH1_0368
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Entry
GBSCOH1_0368 CDS
T03434
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sagt
Streptococcus agalactiae COH1
Pathway
sagt03030
DNA replication
sagt03410
Base excision repair
sagt03420
Nucleotide excision repair
sagt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sagt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GBSCOH1_0368
03410 Base excision repair
GBSCOH1_0368
03420 Nucleotide excision repair
GBSCOH1_0368
03440 Homologous recombination
GBSCOH1_0368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagt03032
]
GBSCOH1_0368
03400 DNA repair and recombination proteins [BR:
sagt03400
]
GBSCOH1_0368
Enzymes [BR:
sagt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GBSCOH1_0368
DNA replication proteins [BR:
sagt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GBSCOH1_0368
DNA repair and recombination proteins [BR:
sagt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GBSCOH1_0368
NER (nucleotide excision repair)
GGR (global genome repair) factors
GBSCOH1_0368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HAD_2
Motif
Other DBs
NCBI-ProteinID:
CDN65834
LinkDB
All DBs
Position
398497..401139
Genome browser
AA seq
880 aa
AA seq
DB search
MTNKNKLLLIDGSSVAFRAFFALYNQIDRFKNNSGLHTNAIYGFHLMLNHILGRVQPSHI
LVAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPYIRQQLDVLGIKHYELEHYEADDII
GTLAKQAEASKEHFDITVVSGDKDLIQLTDTNTVVEISKKGVAEFEEFTPAYLMEKMGIT
PSQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLSEYGSLEGIYENIEAMKQSKMKENLIN
DKEQAFLSKTLATINIASPITIGLEDILYSGPQDIKALSQFYDEMDFKQFKAALGEETSQ
EDFEVDFTEVEQLKPEMFSDNDFYYFEMLGDNYHVEDLIGIAWGNSDTIYATSDVSLLQE
ALFKKALSKPIKTYDFKRSKVLLNRFNIDLPEPAFDTRLAKYLLSTTEDNLVSTIARLYT
NLPLDTDDAVYGKGAKRAIPEKTRFLEHLAKKVKVLVDSEANVMQQLKANEQEELLFEME
QPLANVLAKMEIRGIKVKKNTLNEMAIENQKVIETLTQEIYELAGQEFNINSPKQLGKLL
FETLGLPVEMTKKTKTGYSTAVDVLERLAPISPLVTKILEYRQITKLQSTYIIGLQDYIL
EDGKIHTRYVQDLTQTGRLSSSDPNLQNIPVRLEQGRLIRKAFVPSEDNAVLLSSDYSQI
ELRVLAHISKDEHLIAAFKEGADIHTSTAMRVFGIEKPENVTPNDRRNAKAVNFGIVYGI
SDFGLSHNLGIPRKLAKQYIDTYFERYPGIKNYMETVVREAKDKGYVETLFHRRRSLPDI
NSRNFNIRQFAERTAINSPIQGSAADILKIAMINLDRVLDKGGYKSKMLLQVHDEIVLEV
PNEEIGAIKELVTKTMESAISLSVPLIADENAGETWYEAK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacaagaataaattacttttaattgatggctcatctgtagcctttcgtgctttt
tttgctctttataatcaaattgaccgctttaaaaacaattctggacttcatactaatgcc
atatatggtttccatttgatgttgaatcatattttaggtcgtgtccagcctagtcatatt
ttagtggcttttgatgctggaaaaactactttccgtacggaaatgtatgcagattataaa
ggtgggcgtgctaaaactccggatgaatttcgtgaacaatttccttatattcgtcaacaa
ttagatgtcttaggcatcaaacattatgaattggaacattatgaagccgatgatatcatt
ggtactcttgcaaaacaagccgaagctagtaaagagcattttgatataacggtggtttct
ggggataaagatttaattcaattaacagacactaacacggtagtagaaatctctaaaaag
ggagttgctgagtttgaagaattcacgccagcttaccttatggaaaaaatgggaattacg
ccgagtcaatttattgatttaaaagctttgatgggagataaatcagataatattcctggg
gttactaaaatcggtgaaaaaactggcttgaagttgctatcagaatatggttccttagaa
gggatctatgaaaatattgaggctatgaaacagtctaagatgaaagaaaaccttatcaat
gataaggagcaagctttcttatcaaagaccctagctacaatcaacatagcatcacctata
acaatcggcttagaagatatcctttatagtggaccgcaagatataaaagccttgtctcaa
ttttatgatgagatggattttaaacagtttaaagcagctctgggtgaggagacaagtcag
gaagattttgaggttgactttactgaagtggagcaattaaaaccagaaatgttctccgat
aatgatttttattactttgagatgttaggtgataactaccacgtagaagatttaattggg
atagcttggggaaatagcgatacaatctacgctactagtgatgtatcgttattgcaagaa
gctttatttaaaaaagctttatcaaaacctatcaaaacttatgattttaaaagaagtaag
gtccttttaaatcgttttaatattgatttaccagagccagcctttgatactagattggcc
aagtaccttttgtctactactgaggataatctagtatcaacaattgctaggttatataca
aatctgccactggatactgatgatgctgtttatgggaaaggtgctaaacgcgctatacca
gaaaaaacacgatttcttgagcatctagctaaaaaagtaaaagttttagtggattctgag
gctaatgttatgcaacagcttaaagctaatgagcaagaagaattgctgtttgaaatggag
caacctttagcgaatgttttagctaaaatggaaattcgaggtattaaggttaagaaaaat
accttgaatgaaatggctattgaaaatcaaaaagtcatcgaaaccttaacacaagagatc
tatgaattggctgggcaagagtttaatattaattctccaaaacagttaggaaagttgttg
tttgaaacgttaggtcttcctgtagaaatgactaaaaaaacaaaaacaggttattcaact
gcagtagatgtattagagcgcttagctccgatttctcctcttgtaactaaaattttagag
taccgtcaaatcactaaattgcaatcaacctatattattggtttacaagattatatttta
gaagatggtaaaattcatacacgttatgttcaagatttgactcagacaggtcgtctttca
agttctgacccaaaccttcaaaatataccagttagactagagcaaggacggcttatccga
aaggcttttgttccatcagaagacaatgctgttttattgagttcagattattctcaaata
gaattgcgcgtgttagcacatatttcaaaagacgaacatttgatcgctgcctttaaagag
ggagcagatattcatacttcaacagctatgcgtgtttttggtatcgaaaaacctgagaat
gtcactcccaatgatcgtcgaaatgctaaggctgttaactttggaattgtttatggtatt
tcagattttggtctatcgcataatttaggaatacctcgtaaactagcgaagcaatatatt
gacacctattttgagcgttatcctggaataaaaaactatatggaaacagttgttcgtgaa
gcaaaagataagggttacgttgaaacacttttccatcgtcgtcgttcactaccagatatt
aattctcgtaattttaacattcgccaatttgcagagcgcacagcaatcaattcaccaatc
caaggaagtgcagctgatattcttaaaattgcaatgataaatttagatagggtacttgat
aaaggtggttataaatcaaaaatgctgttgcaagttcatgatgaaattgtacttgaagtc
cctaacgaggagataggagcaatcaaggagttggttacaaaaacaatggagtcagcaatt
agtttatcggtacctttgattgcagatgagaacgcaggtgagacttggtatgaagcgaag
tag
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integrated database retrieval system