Streptococcus agalactiae COH1: GBSCOH1_0479
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Entry
GBSCOH1_0479 CDS
T03434
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sagt
Streptococcus agalactiae COH1
Pathway
sagt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sagt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GBSCOH1_0479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagt03400
]
GBSCOH1_0479
Enzymes [BR:
sagt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GBSCOH1_0479
DNA repair and recombination proteins [BR:
sagt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GBSCOH1_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Fe-ADH
RMI2
Sod_Ni
Motif
Other DBs
NCBI-ProteinID:
CDN65945
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All DBs
Position
512916..514256
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AA seq
446 aa
AA seq
DB search
MSDYLSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPNHQYFSLKDDKSVIQATMWS
GQFKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQA
GYFDDRHKQLLPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQE
IAQTIALANEKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHETDTTL
ADFVADRRAATPTAAAELATTVTKIDILSWITERENRMYQSSLRLIRTKEERLQKSKQSV
IFRQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRLHTYQER
VVQSRRLLSSTMTSQYDSKLARFEKAQDALISLDSSRIVARGYAIIEKNHTLVSTTNGIN
EGDHLQVKMQDGLLEVEVKDVRQENI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactatttatccgtgtcgacactgactaagtatttaaaattaaaatttgacaaa
gacccttatttagagagggtttatttaactgggcaagtgtctaattttcgtcgtcgccca
aaccatcaatacttctctttaaaagatgataaatcagtcattcaggcgacaatgtggtca
ggtcaattcaaaaaactgggttttgaattagaggaagggatgaaggttaatgtagttggc
cgtgttcaactttatgaaccaagcggctcctactctattattgttgaaaaagcagaaccg
gatggtataggagctcttgctatccaatttgaacaactaaagaagaaactctctcaagca
ggttactttgatgatcgtcataagcaattacttcctcaatttgttagaaaaataggagtt
gtgactagtccaagtggagctgttattcgggatattattacaacagtatctcgtcgattc
ccaggagtggaaatattacttttccccacaaaagttcaaggagagggcgcagctcaggag
atagcacaaactattgctttagctaacgagaaaaaggatttggatctattaattgttggc
cgtgggggaggttctattgaggacttatgggcatttaatgaagaatgtgttgtagaagct
atttttgaatctcgtcttcccgttatttctagtgtcggacatgaaactgatacaacttta
gcagattttgtagccgatcgcagagcagcaactccaactgcagcagctgagcttgctaca
acggttactaaaattgatatcttgtcttggattactgaacgtgaaaatagaatgtatcag
tctagccttcgtcttatcaggacaaaagaggagaggttgcaaaaatcaaagcaatcagtt
atttttaggcaaccagagcgtctatatgatggtttccttcaaaaattagataacctaaat
cagcagttaacatattctatgcgtgataaactacaaacagtaagacaaaagcaaggtttg
cttcatcaaaaactgcaaggcatagatttaaaacagcggcttcatacttaccaagagcgt
gttgtgcaaagtagacgactattatcaagtacaatgactagtcagtatgacagcaagcta
gcacgttttgaaaaggctcaagatgcgcttatatcattggatagttctagaattgtagcg
cgtggttacgctattatcgaaaaaaaccatactttagtatctactactaatggaataaat
gaaggagatcatttgcaagttaagatgcaagatggtcttttagaagttgaggtgaaggat
gtcagacaagaaaacatttga
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