KEGG   Streptococcus agalactiae COH1: GBSCOH1_0840
Entry
GBSCOH1_0840      CDS       T03434                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
sagt  Streptococcus agalactiae COH1
Pathway
sagt03030  DNA replication
sagt03430  Mismatch repair
sagt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sagt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GBSCOH1_0840
   03430 Mismatch repair
    GBSCOH1_0840
   03440 Homologous recombination
    GBSCOH1_0840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sagt03032]
    GBSCOH1_0840
   03400 DNA repair and recombination proteins [BR:sagt03400]
    GBSCOH1_0840
Enzymes [BR:sagt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GBSCOH1_0840
DNA replication proteins [BR:sagt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GBSCOH1_0840
DNA repair and recombination proteins [BR:sagt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GBSCOH1_0840
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon POT1PC
Other DBs
NCBI-ProteinID: CDN66306
LinkDB
Position
887735..890839
AA seq 1034 aa
MFAQLDTRTVYSFMDSLVDLKTYVSKSKSLGYQTIGILDHSNLYAAYHFIQEAQKANLRP
IVGFSFDIVVENRSIEVYCIAINTVGYKNLLKLSTAQMSEKMSLNLLTEHLEGVQLILPY
QDALDQLNLPFDYVIGVNLTSPQIPYTKPIIAIDTVRYFQKNDIETLQMLHAIRDNVLLK
DAQYASKNQELKPCQEMTLAFKKRFPEALANLESLVENVVYHFDSDFKLPIFNREIPAGE
ELRTLTQNNLKSKGLWSDAYQERLEKELTIIHKMGFDDYFLIVWDLLRFGRSKGYYMGMG
RGSAAGSLVSYALNITGIDPVKHNLIFERFLNEERYSMPDIDIDLPDIYRGEFLRYVRNR
YGSMHSAQIVTFSTFGAKQAIRDVFKRFGASEYELTNITKKIHFRDNLTSVYNRNLAFRQ
IIDSKIEYQKAYDIAKRIEGNPRQTSIHAAGVVMSDDLLTDHIPLKNGEDMMITQYDASS
VEANGLLKMDFLGLRNLTFVQKMKEKVDKDYGISIQLEAIDLEDKETLKLFAAGQTKGIF
QFEQSGAINLLRRIRPECFEDVVATTSLNRPGASDYTENFINRRFGKEKIDLVDPVIAPI
LQPTYGIMLYQEQVMQIAQTYAGFTLGKSDLLRRAMSKKNSKEMQKMSQSFLEGAVSKGH
RQEDARLIFERMAKFAGYGFNRSHAFAYSALAFQLAYFKAHYSDVFYDIMINYSNSDYLI
DAIDFGFVIEKPSINTISYRDRIYKKKIYLGLKNIKAVPNDLAYWISKNQPFQSIEDFLM
RLPQQFQKSGFISPLIAIGAFDEFDNNRRKITSNLDSLFTFVNELGSLFADTSYHWLEVE
DFSNSEKYEMEQDILGVGISPHPLVGISQKASRPFIPISQVQENSEATILVQLKQVKIIR
TKSSGQQMAFLTVMDINSKMDITVFPETFNIVRDDLQEGKYYYLHGKIQKRDERLQMVLN
GVQEATEERFWILLKNHDNDKKISEILSKYKGHIPVYLHYETTKETIQSKVHLVRKDSGL
ALDLSEFVVKTVYQ
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgtttgcacaacttgatacaagaaccgtttattcttttatggatagcttggttgattta
aagacatatgtctctaaatcgaaatcattaggatatcaaactattggtatcttggaccac
agtaatctttatgcagcatatcattttattcaagaggcgcaaaaggcaaacctaagacca
atagttggatttagctttgatatagtggttgaaaatagatcaatagaagtttactgtatt
gcgataaatacagttggttataagaatctcttgaagttgtcaacggctcaaatgtctgag
aagatgtctctaaatttattgacagaacatcttgaaggggtgcaattgattcttccctat
caagatgctcttgatcagctcaatttaccctttgattatgttattggtgttaatttgacc
tctccgcagattccatataccaaacctattatagccatagatactgttcgatattttcaa
aaaaatgatattgagacattacagatgcttcatgctataagagataatgtcctgttaaaa
gatgcacaatatgcgagcaaaaatcaagaattaaaaccttgtcaagaaatgactctagca
ttcaagaaacgttttcctgaagctttagctaacctagaatctttggtagagaatgttgtt
tatcactttgattctgactttaagttacctatttttaatagagaaattcctgctggagaa
gaattaagaaccttaactcaaaataacttaaaaagtaaaggtttatggagcgatgcttat
caagagcgtctcgaaaaagaattaacaatcattcacaaaatgggctttgatgactatttc
cttattgtgtgggatttattaagatttggtcgtagtaagggctactatatgggaatggga
cgtggttcagcagcgggaagtttagtctcatatgctttaaatattaccggtatcgatcct
gtcaaacataatttaatttttgaacgttttttaaatgaagagcgttattcgatgccagat
attgatattgatcttccggatatttatcgtggagaattcttgcgctatgtacgtaatcga
tatggttcaatgcattctgcacagattgtaaccttctcaacttttggtgcgaaacaggct
attcgagatgtttttaaacgctttggtgcatcagagtatgagttaacaaacataactaaa
aaaattcatttcagagataatttgaccagtgtttataaccgcaacttagctttcagacaa
ataatagatagtaaaattgaataccaaaaagcctatgatattgctaagcgtattgaagga
aatcctagacagacttctattcatgccgctggggtagtaatgagtgacgatttgttaaca
gatcatattcctttaaaaaacggtgaggatatgatgataacgcaatatgatgctagttct
gttgaggctaatggtcttctaaaaatggactttctaggtcttcgaaatttgacatttgtt
cagaaaatgaaggagaaagtcgataaggactacggtatctctatacaattagaagctatt
gatttagaagataaagagactctaaaactatttgcggctggtcaaacaaaggggattttt
caatttgagcaaagtggagctattaatttgttgcgacgtattaggccagagtgttttgaa
gatgtggtagctactaccagcttgaataggcctggtgcaagtgattatactgagaatttt
ataaaccgtcgttttggtaaagaaaaaatcgatttagtagatcctgtcatagctccaatt
ttacaacctacctatggcataatgctctatcaagaacaggttatgcagattgcccagacc
tacgcaggttttacgctaggcaagtctgatttgctcagacgtgctatgtctaagaaaaat
tctaaggagatgcaaaagatgtctcaatccttcttagagggtgcagtatctaagggacat
cgtcaagaagatgctcgacttatatttgaacgcatggctaaatttgcaggttatgggttt
aatcgcagccatgcctttgcttattcggctttagcttttcaattagcctatttcaaagcc
cattattccgatgtcttttatgacatcatgataaattattcaaatagtgattatctaatc
gatgctattgattttggttttgttattgaaaaaccttcaattaatactatttcatacaga
gaccgcatctataaaaagaaaatttatttaggtttaaaaaatattaaggctgttcctaac
gacttggcttattggatttctaaaaatcaaccatttcagagtattgaagattttctaatg
agactgccacagcagtttcaaaaaagtggttttatttctccgctaattgctattggagca
tttgacgaatttgataacaatagacggaaaatcacctctaatcttgattctttatttaca
tttgtaaatgaactaggtagtttatttgcagatacctcatatcattggttagaagtagaa
gatttctctaattctgagaaatatgaaatggaacaagatatcttaggagtaggaatcagt
ccgcaccctttagtggggatttcacaaaaagctagccgtccgtttataccaattagtcaa
gtccaagaaaatagcgaagctactattttagttcagctaaagcaggtcaaaatcattagg
acaaaaagttctggacaacaaatggctttcttgactgttatggatattaattcaaaaatg
gatattactgtttttcctgaaactttcaatattgtaagagatgatttacaagaagggaaa
tattattacttgcatggaaaaattcagaagcgagatgagcgattacagatggttttaaac
ggtgttcaagaagcaacggaggaacgtttttggatacttctaaaaaatcatgataacgac
aaaaaaatatcggaaatattgtccaaatataaagggcatattcctgtctatttgcattat
gaaacaactaaagaaactatccaaagcaaagtacatttggttagaaaagatagtggctta
gcccttgatttatctgaatttgttgtgaaaacggtttatcaataa

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