KEGG   Streptococcus agalactiae COH1: GBSCOH1_1556
Entry
GBSCOH1_1556      CDS       T03434                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
sagt  Streptococcus agalactiae COH1
Pathway
sagt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sagt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GBSCOH1_1556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sagt03400]
    GBSCOH1_1556
DNA repair and recombination proteins [BR:sagt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GBSCOH1_1556
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GBSCOH1_1556
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 RsgA_GTPase AAA_29 AAA_21 nSTAND1 AAA_22 AAA_23 nSTAND3 AAA_33 Viral_helicase1 AAA_18 nSTAND6 AAA_14 ATPase NACHT MMR_HSR1 NB-ARC BCA_ABC_TP_C cobW DUF87 DnaJ_CXXCXGXG NTPase_1 MeaB IIGP DUF463 Septin YobI-ATPase PRK T2SSE Dynamin_N
Other DBs
NCBI-ProteinID: CDN67022
LinkDB
Position
complement(1619625..1622453)
AA seq 942 aa
MQDKLMIRGARAHNLKNISVDIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGNMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPY
CINGHGAITASSVEQIVDKVLALPERTKMQILAPIIRRKKGQHKSTFEKIQKDGYVRVRI
DGDIHDVTEVPELSKSKMHNIDIVVDRLINKEGIRSRLFDSVEAALRLSDGYVVIDTMDG
NELLFSEHYSCPECGFTVPELEPRLFSFNAPFGSCPTCDGLGIKLEVDIDLVIPDRSKTL
REGALVPWNPISSNYYPTMLEQAMTQFGVDVDTPFEKLSKAEQDLALYGSGEREFHFHYI
NDFGGERNIDLPFEGVVNNINRRYHETNSDYTRNVMREYMNELKCNTCHGYRLNDQALCV
RVGGEEGLNIGQVSDLSIADHLELLETLRLSSNEQLIARPIIKEIHDRLSFLNNVGLNYL
NLSRSAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLIDSLKKMRDLG
NTLIVVEHDEDTMMAADWLIDVGPGAGAFGGEIVASGTPKQVAKNTKSITGQYLSGKKVI
PVPSERRVGNGRFLEIKGAAENNLQNLDVKFPLGKFIAVTGVSGSGKSTLINSILKKAVA
QKLNRNSDKPGKYVSLEGIEYVDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCESCSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHY
KEKNIAQILDMTVNDAVTFFAAIPKIARKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHADDIARLLKVLDRFVDDGNTVLVIEHNLDVIKTADH
IIDLGPEGGIGGGQIVAIGTPEEVAENPKSYTGYYLKEKLAR
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgcaagataaattaatgataagaggagcaagagctcacaatttaaaaaatataagtgtc
gacattccacgagacaagttagttgtcgttacgggactatcaggatcaggtaagtctagt
ttggcctttgacactatctatgcagaaggacaacgtcgttacgttgaaagtctttctgct
tacgcgcgccaatttttgggaaatatggaaaagcctgatgtagattctattgatggcctt
agtccagctatttctattgatcagaaaacaacaagtaagaatcctcgctctactgttggg
actgtaacagaaattaacgattatttacgtttgctttatgctcgtgttggaaccccatat
tgtatcaatggtcacggagccatcacagcatcttctgtagagcaaattgtggataaggta
ctagcgcttccagagcgaacaaagatgcaaattttagccccaattatacgtcgaaaaaaa
ggacaacacaaatcaacatttgagaaaatacaaaaagatggttacgttcgtgttcgtatt
gatggtgatattcacgatgttactgaggtgcctgaattatcaaaaagtaagatgcacaat
attgatattgtagtagatcgattaattaataaagagggcattcgttcccgcttatttgat
tccgttgaagcggctctacgtttgtcggatggttatgtcgttattgatacaatggatggc
aatgagttattgttttcagagcattattcttgtcctgaatgtggttttactgttcctgaa
ttagagccacgccttttttcttttaatgctccctttggttcttgtccgacctgtgatggc
ttaggaattaagttagaagtagatatagatttggttattccagatagaagtaagaccctt
agagaaggggccttagttccttggaatccaatttcatcaaattattatccaacgatgcta
gagcaagctatgactcaatttggtgttgatgtggatacgccatttgaaaaattaagcaag
gcggagcaggacctagccctatatggttcaggcgaacgagagttccatttccattatatt
aacgattttggaggcgagagaaatattgatttgccttttgaaggggttgtcaataatatt
aatcgtcgttaccatgaaactaatagcgattacacacgcaatgttatgcgagaatatatg
aacgagctaaaatgtaacacttgtcatggctatcgtctcaatgatcaagcactttgcgta
agagttgggggagaagaaggtcttaatattgggcaagtctcagatttatcgatagcagac
catttagaacttttagaaacattgcgtttatcttcaaatgaacaattaattgctcgacca
attatcaaagaaatccatgaccgtctaagtttcttaaataatgttggacttaattattta
aatctgtcacgttctgcaggaacactttccgggggcgagagtcaacgtattcgtttggct
actcaaattgggtctaatttatcaggtgtcctttatgtacttgatgagccgtccattgga
cttcatcagcgagacaatgaccgtttgattgatagtcttaagaaaatgcgtgatttgggt
aatacgcttattgttgttgaacatgatgaagatacaatgatggcagctgattggttaatc
gatgtgggacctggcgctggtgcgtttggtggtgagattgtggcctctggtacaccgaag
caagtagctaaaaatactaaatctattacaggacaatatttgtcaggtaagaaagtgatt
cctgtgccatctgaacgaagagtaggtaatggtcgctttttagaaatcaaaggtgcggca
gaaaacaacctacaaaatttagatgtcaagttccctctcggtaaatttattgccgtaact
ggtgtctcaggttctggaaaatcaaccttaattaatagtattttgaaaaaagctgttgcg
cagaagcttaaccgtaactcagataaaccaggtaaatatgtttctttagaaggcattgaa
tatgttgatcgattgattgatattgatcaaagtccaattggtcggactccacgttctaat
cccgcaacctatacaggtgtttttgatgatattcgtgatctttttgctcaaactaatgag
gcaaagattcgaggttataaaaaaggacgcttctcatttaacgtcaaaggtggacgttgt
gagtcttgttctggcgatggtatcatcaaaattgagatgcattttttaccagatgtctac
gttccttgtgaagtatgccacggcacgcgctataatagtgagactctggaagtacattac
aaagaaaaaaatattgcacaaattcttgatatgacagtgaatgatgcagttacatttttt
gcagctattcctaaaattgctcgtaagttacagactattaaggatgttggtttgggatat
gtcactttggggcaaccagctacaaccttatcaggaggagaagctcagcgaatgaagctg
gcaagtgaattacataagcgttcgacaggtaagagtctttacatattagacgaaccaaca
acggggcttcatgcagatgatattgctcgtttacttaaggttttggatcgttttgtagat
gatggtaatacagtgcttgttattgagcataaccttgatgttattaaaactgctgaccac
attattgatcttggccctgaaggaggtattggtggcggacaaattgtagctatcggaaca
ccagaagaagttgctgaaaatcctaaatcctatacaggatattatttaaaagagaagtta
gcaagatag

DBGET integrated database retrieval system