Streptococcus agalactiae COH1: GBSCOH1_1875
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Entry
GBSCOH1_1875 CDS
T03434
Name
(GenBank) chaperonin, 60 kDa
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sagt
Streptococcus agalactiae COH1
Pathway
sagt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBSCOH1_1875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagt03019
]
GBSCOH1_1875
03110 Chaperones and folding catalysts [BR:
sagt03110
]
GBSCOH1_1875
03029 Mitochondrial biogenesis [BR:
sagt03029
]
GBSCOH1_1875
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sagt04147
]
GBSCOH1_1875
Enzymes [BR:
sagt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GBSCOH1_1875
Messenger RNA biogenesis [BR:
sagt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GBSCOH1_1875
Chaperones and folding catalysts [BR:
sagt03110
]
Heat shock proteins
HSP60 / Chaperonin
GBSCOH1_1875
Mitochondrial biogenesis [BR:
sagt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GBSCOH1_1875
Exosome [BR:
sagt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GBSCOH1_1875
Exosomal proteins of other body fluids (saliva and urine)
GBSCOH1_1875
Exosomal proteins of breast cancer cells
GBSCOH1_1875
Exosomal proteins of colorectal cancer cells
GBSCOH1_1875
Exosomal proteins of bladder cancer cells
GBSCOH1_1875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4142
Motif
Other DBs
NCBI-ProteinID:
CDN67341
LinkDB
All DBs
Position
complement(1946977..1948599)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKDIKFSADARSAMVRGVDILADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIE
TAVSAAVEELKEIAQPVSGKEAIAQVAAVSSRSEKVGEYISEAMERVGNDGVITIEESRG
METELEVVEGMQFDRGYLSQYMVTDNEKMVSELENPYILITDKKISNIQEILPLLEEVLK
TNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVVT
EDLGLDLKDATMQVLGQSAKVTVDKDSTVIVEGAGDSSAIANRVAIIKSQMEATTSDFDR
EKLQERLAKLAGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTALVNV
IEKVAALKLNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANG
EWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPEAPTAPAMDPSMMGGF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattttcagcagatgcccgctcagcaatggtgcgtggtgttgat
attttagctgatacagtcaaagtaacattaggtcctaaaggccgtaatgttgttcttgaa
aaagcatttggttctcctttaattacaaatgatggtgtgacaattgctaaagaaattgag
ctagaagatcactttgaaaatatgggagctaaacttgtgtcagaagtggcttcaaaaact
aatgatattgcaggggatggcactacaactgctactgttttgacccaagctattgtacgg
gaaggtcttaaaaatgtaactgcaggggcaaatccgattggcattcgtcgtggtattgaa
acagctgtttcagcagcagttgaagagctaaaagagattgcacaaccagtttcaggcaaa
gaagctattgctcaagttgcggctgtgtcttcacgttctgaaaaagttggggaatacatt
tctgaagctatggagcgcgtgggtaatgatggtgttatcactattgaagaatcgcgaggt
atggaaacagagcttgaagttgtggaaggaatgcagtttgaccgtgggtacttgtcacag
tatatggtaactgataacgagaaaatggtctctgaacttgagaatccgtatatccttatt
acagataagaaaatttcaaatatccaagaaattttaccattattagaagaggttcttaaa
acaaatcgtccgttgctaatcatcgctgatgatgttgatggagaagctctcccaacgctt
gttcttaacaaaattcgtggaactttcaatgtcgtagctgttaaagcgcctggatttggt
gatcgtcgtaaagccatgctggaagatattgctatcctaacaggaggaactgtcgttact
gaagaccttggtttagacttaaaagatgctactatgcaagttttaggacagtctgctaaa
gtaacagtagataaagattctactgttattgtcgaaggtgccggtgactcatcagcaatt
gctaatcgcgtagccatcattaagtcacagatggaggctacaacttctgattttgatcgt
gaaaaattacaagaacgacttgctaagttagccggtggtgtagcagtaattaaagttggt
gcggcgactgaaacagaattaaaagagatgaaacttcgtatcgaagatgcgttaaatgca
acgcgtgctgcagttgaagaaggtattgtttcaggtggaggtacggctcttgtgaacgtt
attgaaaaagtagcggcactgaaacttaatggtgatgaggagactggacgtaatattgtt
cttcgtgctctcgaagagcctgttcgtcaaattgcttacaatgctggatatgaaggttca
gttattattgaacgtttaaaacagtctgaaattggtacaggatttaatgcggctaatgga
gaatgggtagatatggttaccacaggtatcattgatcctgtcaaagtaacacgttctgca
cttcaaaatgcggcatctgtagcaagtcttatcttgactacagaagcagtagtagcaaat
aaacctgaaccagaagctcctacagctcctgcaatggatccatctatgatgggtggcttc
taa
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