Sagittula sp. P11: CDO87_00115
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Entry
CDO87_00115 CDS
T05219
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sagu
Sagittula sp. P11
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_00115
Enzymes [BR:
sagu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CDO87_00115
DNA repair and recombination proteins [BR:
sagu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CDO87_00115
Prokaryotic type
CDO87_00115
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AUC51690
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All DBs
Position
complement(20268..21686)
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AA seq
472 aa
AA seq
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MTDTPPTLVWFRRDLRLSDHAALTEAAKRGPVIPVFIRDALVEGLGTAPQWRLGLGLGAF
ADALKDKGSRLILRSGPAPEVLSELVEETGARAVYWSRAYDPDSVERDTRVKEVLKDKGI
GAQSLTGHLMFEPWTVETGQGGFYKVYTPFWKAVCDRDVPAPLSSPSDLKAPTTWPDSET
LADWNLGQGMRRGSDVVRPYVRLGEQAAQTRLGVFMRDKVADYGTTRDEVSKDGTSCLSE
NLSLGEISPAQCWHAGRRAMEDGKSGAQTFLKELVWREFAYHLMWHTPHLLTGNWREEWD
AFPWKTDERLREVKAWKQGRTGIPFVDAAMRELYVTGRMHNRARMIVASYLTKHLMCHWK
IGMAWFEDCLIDWDPASNAMGWQWSAGSGPDATPYFRVFNPVTQRDKFDPDCAYVNRWIA
EGRRTPSDTALSYFDAIPESWPMTPGDAYPDAIVGPKEGREAALEAYQNRDF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacgccgccgaccctcgtctggttccgccgggacctgcgcctctccgaccat
gccgcgctgaccgaagccgcgaaacgcggcccggtgatcccggtcttcatccgcgacgcg
ctggtagagggcctcggcaccgcccctcaatggcggctcggcctggggctcggggccttc
gccgatgcgctgaaggacaagggcagccggctgatcctgcggtccggtcccgcgcccgaa
gtgctgtcggagctggttgaggaaaccggcgcccgggccgtctactggagccgcgcctac
gatcccgacagcgtggagcgcgacacccgcgtgaaggaggtgttgaaggacaagggcatc
ggcgcgcaaagcttgaccggccacctgatgttcgaaccctggacggtcgagacggggcag
ggcggcttctacaaggtctacacgcccttctggaaagccgtgtgcgaccgcgacgtgccc
gcgcccctttcctcaccctccgacctgaaggcgcccactacgtggcccgacagcgaaacc
ctcgccgactggaacctgggccagggcatgcgccgcggctccgatgttgtgcgtccctac
gtccggcttggcgaacaggccgcgcagacccggctcggggtcttcatgcgcgacaaggtg
gcggactacggcacgacccgcgacgaggtctcgaaggacggcacatcctgcctcagcgag
aacctttcgctgggcgagatcagcccggcccaatgctggcacgccggccgccgcgcgatg
gaggacggcaagtccggcgcccagacgttcctcaaggagctggtctggcgcgagttcgcc
tatcacctgatgtggcacacgccgcacctgctgaccggcaactggcgcgaggaatgggac
gccttcccgtggaagaccgacgaacgcctgcgcgaagtcaaggcctggaagcaggggcgc
accggcattcccttcgtcgacgccgccatgcgtgagctctacgtcaccggacggatgcac
aaccgcgcccgcatgatcgtggcgagctacctgaccaagcacctgatgtgccactggaag
atcggcatggcctggttcgaggactgcctgatcgactgggacccggcctcgaacgccatg
ggctggcaatggtctgcgggttccggtcccgacgccacaccctatttccgcgtcttcaac
cctgtcacccagcgcgacaagttcgatcccgactgcgcctacgtgaaccgctggatcgcc
gaaggccgcaggacgccctcggacaccgcgctcagctatttcgacgccatccccgaaagc
tggccaatgacaccgggcgacgcctatcccgatgcgatcgtcgggccgaaggaaggccgc
gaagccgcactcgaggcctaccagaaccgcgacttctga
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