Sagittula sp. P11: CDO87_04555
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Entry
CDO87_04555 CDS
T05219
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sagu
Sagittula sp. P11
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagu03032
]
CDO87_04555
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_04555
Enzymes [BR:
sagu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CDO87_04555
DNA replication proteins [BR:
sagu03032
]
Prokaryotic type
DNA Topoisomerases
CDO87_04555
DNA repair and recombination proteins [BR:
sagu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDO87_04555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
AUC52505
LinkDB
All DBs
Position
931992..932963
Genome browser
AA seq
323 aa
AA seq
DB search
MLATLSLTYYPDSRPGIRRLRCGRGFSYLAPDGTRIDDTTERARIKALAVPPAYEDVWIC
PLPDGHLQATGRDARSRKQYRYHPDWRSWRDAQKYDHLRTFGEILPGLRRRIRRTLRQGE
VGDHAFALAAILALLDRASLRIGTADYARENRTYGATTLKRRHVALDGDGLRFRFAAKGG
KRVDKSLQDRTLNRILTRMGDLPGPELIKWIDDDGARHAVSSGEVNAWLEEVTGTEGLTA
KTFRTWNGTVAALEAAEQADKPTIKRMAEAAADRLHNTPAIARSSYIHPRVIALAEDPRD
LSAAPDVRGLRRSECRLLHLLSD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccacattgtccctcacctactacccagactctcgccccggcatacgccggctg
cggtgcggacgcggtttttcctatcttgcgccggacggcacgcgcatcgacgacaccacg
gaacgcgcccggatcaaggcgctggcggtgccgcccgcctatgaggacgtgtggatctgc
ccgctgccggacgggcacctgcaagcgacgggccgcgacgcccgcagccgcaagcagtac
cgctaccaccctgactggcggtcgtggcgcgatgcccagaagtacgaccatctgcgcacc
ttcggagagatcctgcccggcctgaggcggcgtatccggcgaacgctgcggcagggtgag
gtcggcgatcatgcctttgccctcgccgccattctggccctgctggaccgcgcctccctc
aggatcggcacggcggactatgcccgcgaaaaccggacctatggcgccaccacgctgaag
cggcggcatgtggcgctcgacggcgacgggctgcggttccgctttgccgcgaaagggggc
aagcgggtggacaagtcgctgcaggaccggacgctgaaccgcatcctgacgcgcatgggc
gacctgcccggtcccgaactcatcaagtggatcgacgacgacggcgcgcgtcacgcggtc
agctcaggcgaggtcaacgcctggctcgaggaggtcaccggcaccgagggcctgaccgcc
aagacgttccgcacctggaacggcactgttgccgcgcttgaggctgccgagcaggcggac
aagcccacgatcaagaggatggccgaggcggcggccgaccgtctgcacaacacgccggcc
attgcccgctcctcctatatccaccccagggtgattgccctcgccgaagacccgcgcgac
ctgtcggcggcgccggatgtgcgaggcctgcgccgcagcgaatgccgccttttgcacctg
ctgtcggattga
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