Sagittula sp. P11: CDO87_05225
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Entry
CDO87_05225 CDS
T05219
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CDO87_05225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_05225
Enzymes [BR:
sagu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDO87_05225
DNA repair and recombination proteins [BR:
sagu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CDO87_05225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
Zn_ribbon_PriA
ResIII
Helicase_C
AAA_22
AAA_5
AAA_16
MarR_2
ADD_ATRX
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AUC55743
LinkDB
All DBs
Position
complement(1069124..1071313)
Genome browser
AA seq
729 aa
AA seq
DB search
MQEFFEQGARVGVLTAQPLDRLLDYRAPEGGCFLGAYVEVPLGPRKVLGVVWGPGEGQFD
AAKLRSVIRVLDAAPMRAEMRAFLEKAGAYTLTPMPAMLRLATRAPGLGDGPSMRKVYRR
GEGEPERMTDARRRVIAASEELGGLALTLGELAEAAGVTSSVVKGLVKSGAIREEESPRD
TAFPALDPDYGGKDLTEDQAAAADVLRDGQRAGTYGTVLLKGVTGSGKTEVYLEAVAECL
RQGRQALVLLPEIALSAEFLARVEARFGARPAEWHSGVTMTERRRVWRMVGEGRAQMVVG
ARSALFLPFQRLGLIVVDEEHDTSYKQEDGVLYNARDMAVLRASILGAQVVLASATPSLE
SWANADAGKYRRLVLTSRFGEAVLPEMRTIDMRRQEVPSNRWISPALAAAVNARMERGEQ
ALLFLNRRGYAPVTLCRACGQQIGCDHCDARMVEHRFLKRLVCHQCGETKPMPEVCPSCG
AEDKLAAVGPGVERLAEEAQAQFPEARIAVLSSDLYGTARELKAQIEGIAAGGADIIIGT
QLVAKGHNFPLLTLVGVIDADLGLQGSDLRAAERTFQLMRQVAGRAGRAEKRGEALLQTY
QPEHPVIRSILAGDEEAFWSAEADERRLGGMPPFGRLAGIILSGPDVQEVFDLGNWLARN
DGALRRVGAQVFGPAPAPIARVRGRHRVRLLVRAEKGVALQGALADWVRPVKLKGDLRLA
IDIDPQSFF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttcttcgaacagggcgcgcgcgtcggcgtgctgacggcgcagccgctggac
cggctgctggattaccgcgcgcccgagggcggctgtttccttggtgcctatgtcgaggtg
ccgctgggcccgcgcaaggtgctgggcgtggtctgggggccgggcgagggccagttcgac
gccgccaagctgcgcagcgtgatccgggtgctcgacgcggcgccgatgcgggccgagatg
cgcgccttcctcgaaaaggccggggcctacacgctgacgccgatgcccgcgatgctgcgg
ctggcgacccgcgcgccggggctgggcgacgggccgtcgatgcgcaaggtctaccgccgg
ggcgagggcgagccggagcgcatgaccgacgcccggcggcgggtgatcgcggcctcggaa
gagctgggcggcctcgcgctgacgctgggcgagctggcggaggcggcgggcgtgacctct
tcggtggtgaaggggctggtgaagagcggcgccatccgcgaggaggaaagcccgcgcgac
acggccttccccgcgctcgaccccgactatggcggcaaggacctgacagaggaccaggcg
gcggcggcggatgtcctgcgcgacggtcagcgggcaggcacatacggcaccgtgctgctt
aagggggtgaccggttccggcaagacggaggtctacctcgaagcggtcgccgaatgcctg
cggcaggggcggcaggcgctggtccttctgccggagatcgcgctttcggcggagttcctc
gcccgggtggaggcccgcttcggcgcgcggcccgcggagtggcattccggcgtgaccatg
acggagcggcgccgcgtctggcgtatggtcggcgagggccgcgcgcagatggtggttggc
gcgcgctcggccttgttcctgccgttccagcggcttgggctgatcgtcgtcgacgaggaa
cacgacacttcctacaagcaggaggacggtgtcctctacaacgcgcgggacatggcggtg
ctgcgggcctccatcctcggcgcgcaggtggtgctggcctccgccacgccgagcctcgaa
agctgggccaatgcggatgcgggcaagtaccggcggctggtcctgacctcgcgcttcggc
gaggcggtgctgccggagatgcgtaccatcgacatgcggcggcaggaggtgccctcgaac
cgctggatctcgcccgcgctggccgcggcggtgaatgcgcggatggaacggggagagcag
gcgcttctgttcctcaaccgccgtggctatgcgccggtgacgctctgccgggcctgcggg
cagcagatcggctgcgaccactgcgatgcgcggatggtggagcaccgttttctcaagcgg
ctggtctgccaccagtgcggcgagacgaagcccatgccggaggtctgcccgtcctgcggc
gcggaggacaagctggccgcggtcggccccggtgtcgaacggctggctgaggaagcgcag
gcgcagttccccgaggcgcggatcgcggtgctgtcctcggacctttacggcacggcgcgc
gagctgaaggcgcagatcgaggggatcgcggcgggcggcgcggacatcatcatcggcacg
caacttgtggcgaaggggcacaacttcccgctgctgacgctggtgggggtgatcgacgcg
gacctcgggctgcaggggtcggacctgcgcgcggccgagcggaccttccagctcatgcgg
caggttgcggggcgcgccgggcgggcggagaagcgcggcgaggcgctgttgcagacctac
cagccggagcacccggtgatccgctcgattcttgccggtgacgaggaggcgttctggagc
gcggaggccgacgagcgccggctgggcgggatgccccccttcggacggctggcggggatc
atcctgtcggggccggacgtgcaggaggtcttcgacctcggcaactggctggcgcgcaac
gacggcgcgctgcggcgggtgggggcacaggtcttcggtcccgcgcccgcgcccatcgcc
cgggtccgggggcggcaccgcgtgcgtctgctggtgcgggccgagaagggcgtggcgctg
cagggcgcgctggccgactgggtgcgcccggtgaagctgaagggcgacctgcggctggcc
atcgatatcgacccgcagtcgttcttctga
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