Sagittula sp. P11: CDO87_07290
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Entry
CDO87_07290 CDS
T05219
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sagu
Sagittula sp. P11
Pathway
sagu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDO87_07290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_07290
DNA repair and recombination proteins [BR:
sagu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDO87_07290
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CDO87_07290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Kinesin
eIF3_p135
AAA
Motif
Other DBs
NCBI-ProteinID:
AUC53013
LinkDB
All DBs
Position
1486388..1488583
Genome browser
AA seq
731 aa
AA seq
DB search
MHNNSPQQMPMMHAAAPDVRTREKLEGGKRFVMQTTFSPAGDQPTAIAELAGGIDEGERD
QVLLGATGTGKTFTMAKVIEQTQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYD
YYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETY
GAMTQDLFVGKEYDQRKIMADLIAQQYRRNDQGFSRGTFRVRGDVLEVWPAHLEDRAWRL
SFFGEELEGLTEFDPLTGTKTDSFERIRIYANSHYVTPRPTMQQAIQGIKKELRQRLDQL
VGEGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAI
VFADESHVSVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSIFVSA
TPAAWELEQSGGVFSEQVIRPTGLLDPQVEIRPVKMQVDDLLDEIRKVAANGMRTLATVL
TKRMAEDLTEYLHEQGIKVRYMHSDIDTIERIEILRDLRLGAFDVLVGINLLREGLDIPE
CGLVAILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADRMTGSMERAIGETNRRREK
QMAYNEEHGITPETVKKNVDDILAGLYQGDTDQSRVTAKIDPKRQGSNIAAVLEGLRTDM
RKAAENLEFEEAARLRDEVKRLEAVELAVTDDPLARQQAVERASEEATKAKGRSTAGRPG
QRGGNVKRRKR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacaattcgccgcaacagatgcccatgatgcatgccgccgcgccggatgtgcgc
acccgcgaaaagctcgaaggcggcaagcggttcgtcatgcagaccaccttctctccggcg
ggcgaccagccgaccgccatcgcggaacttgccggcggcatcgatgagggcgagcgcgac
caggtgcttctgggtgcgacgggcaccggcaagaccttcaccatggccaaggtgatcgaa
cagacccagcgcccagcgatcatcctcgcccccaacaagacactggccgcccaattgtac
ggcgaattcaaggggttctttccggacaacgcggtcgagtacttcgtcagctattacgac
tactaccagccggaggcctacgtcgcgcggtccgacacctatatcgagaaggaaagccag
atcaacgaacagatcgaccggatgcgccactcggccacccgggcgctgctggaacgcgac
gacgtgatcatcgtggcgtccgtgtcctgcatctacggtatcggttcggtcgagacctac
ggggcgatgacgcaggacctgttcgtcggcaaggagtatgaccagcgcaagatcatggcc
gacctcatcgcgcagcagtatcgccgcaacgatcaggggttttcgcgcggcaccttccgg
gtgcgtggcgacgttctggaagtctggcctgcccacctcgaggaccgcgcatggcggctg
tccttcttcggcgaggaactggaagggctgaccgaattcgatccgctgaccggcaccaag
accgacagtttcgagcgcatccgcatctacgccaactcacactacgtcacaccgcgtccg
acgatgcagcaggcgatccagggcatcaagaaggagttgcgccagcggctcgaccagctt
gtcggcgaggggaaactgctggaggcgcaacggcttgagcagcggacgaacttcgacctg
gagatgctggaggccaccggcgtctgcaacgggatcgagaactactcgcgctacctgacg
ggccgcgcgccgggcgaaccgccccccaccctcttcgaattcatccccgacaacgccatc
gttttcgccgacgaatcccacgtctccgtgccgcagatcggcggcatgtatcgcggcgac
taccggcggaaattcacgctggcggaacacggtttccgcctgccgtcctgcatggacaac
cgccccctcaagttcgaggaatgggacgcgatgcgcccgcagtcgatcttcgtctccgcc
acccccgccgcgtgggagctggagcaatcgggcggtgtgttctcagaacaggtgatccgc
cccaccggccttctggacccgcaggtggagatccggccggtgaagatgcaggtcgacgac
ctgctggacgagatccgcaaggtcgcggcaaacggcatgcgcaccctcgccacagtgctg
accaaacgcatggccgaggacctgacggagtacctgcacgaacagggcatcaaggtgcgc
tacatgcactccgacatcgacaccatcgaacggatcgagatcctgcgcgacctgcgcctt
ggcgcgttcgacgtgctggtggggatcaacctgctgcgcgagggcctggacatcccggaa
tgcgggctggtggccatcctcgacgccgacaaggagggcttcctgcggtccgagacctcg
ctgatccagaccatcgggcgggcggcgcggaacgccgatggccgggtcatcatgtacgcc
gaccgcatgaccggatccatggaacgcgctatcggagagaccaaccgccgccgcgagaag
cagatggcctacaacgaggaacacgggatcacgccggagacggtgaagaaaaacgtcgac
gacatcctcgccggactctaccagggcgacaccgaccagtcccgcgtcaccgcgaagatc
gacccgaagcgtcagggctccaacatcgccgctgtgctggaaggcttgcggacggatatg
cgcaaggcggcggagaacctcgagttcgaggaggccgcacgtctgcgcgacgaggtcaag
cggctggaggcggtagaactggcggtgaccgacgacccgctggcccgacagcaggcggtc
gaacgggcctccgaagaggcaaccaaggccaagggccgctcgacagcagggcgtcccggc
cagcgcggcgggaacgtcaagcgacgcaagcggtag
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