Sagittula sp. P11: CDO87_07825
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Entry
CDO87_07825 CDS
T05219
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDO87_07825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagu03019
]
CDO87_07825
Enzymes [BR:
sagu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CDO87_07825
Messenger RNA biogenesis [BR:
sagu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CDO87_07825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
AUC55776
LinkDB
All DBs
Position
complement(1607335..1608612)
Genome browser
AA seq
425 aa
AA seq
DB search
MLGLPPRLLANLADLNITDPTPIQTQAIPHALNGRDVMGLAQTGTGKTAAFGLPIVTTIM
RDQSRPGPKQVHGLILAPTRELAKQIVDNLRAYSANTPVKIGLVTGGNSINGQINRLAKG
TDLLVATPGRLIDLMEQKAVRLDATRFLVLDEADQMLDLGFIHALRQIAKVLPKERQTML
FSATMPKQMAEIAAAYLTDPIRIEVTPPGQPVERIDQSVHFVEQKSKTSLLVNHLDGHRT
EAALVFARTKHGAEKLKRHLEDKGFAAGSIHGNKSQGQRDRALKAFRDGELTVLVATDVA
ARGIDIPSVRYVYNYDLPNVADNYVHRIGRTARAGRDGTAVAYCSAEEMGEFKAIVKLMG
REIEVAGGEAWEPVKPVGRGNGRGRGGRPGGGGHGAKHGGGHKPAHAKPAAAKGRPRRQR
RAKAA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctgccgccccgcctcctggcgaacctcgccgacctgaacatcaccgatccg
accccgatccagacccaggccatcccgcacgcgctgaacggccgcgacgtgatgggcctt
gcgcagacaggcaccggcaagacggccgccttcggcctgccgatcgtcaccaccatcatg
cgcgaccagtcgcgccccggcccgaaacaggtgcacgggctgatccttgcgccgacccgc
gagctggccaagcagatcgtggacaacctgcgcgcctactccgccaacaccccggtcaag
atcggcctggtcaccggcggcaattccatcaacgggcagatcaaccgtcttgccaagggc
accgacctgctggtcgccaccccgggccgcctgatcgacctgatggagcagaaggccgtc
cggctggacgcgacccgcttcctcgtgctggacgaggccgaccagatgctggacctcggc
ttcatccacgcgctgcggcagatcgccaaggtcctgccgaaagagcgtcagaccatgctg
ttctcggccaccatgccgaagcagatggccgagatcgccgcggcctacctgaccgacccc
atccggatcgaagtcacacctccgggccagccggtcgaacgcatcgaccagtcggtgcac
ttcgtcgagcagaagtccaagacatcgctgctggtcaaccacctcgacggtcaccgcacc
gaggccgcgctggtctttgcccgcaccaagcacggtgcggagaagctgaagcgccacctc
gaggacaagggctttgccgccggttcgatccacggcaacaagagccagggtcagcgggac
cgcgcgctgaaggccttccgtgacggagagctgacggtgctggtcgcgacagacgtggcc
gcccgcgggatcgacatcccgtcggtgcgctacgtctacaactacgatctgcccaacgtc
gccgacaactacgtccaccggatcgggcgcaccgcgcgcgcgggccgggacgggacggcg
gtcgcctactgctcggccgaggagatgggcgagttcaaggccatcgtgaagctgatgggc
cgcgagatcgaggtcgcgggcggcgaagcctgggaaccggtgaagcccgtgggccgcggc
aacggtcgtggccggggcggtcgtcccggtggcggcggtcacggtgcgaagcacggcggc
ggccacaagccggcccatgccaagcccgccgcagccaagggccgtccgcgccgtcagcgc
cgcgccaaggcagcctga
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