Sagittula sp. P11: CDO87_07860
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Entry
CDO87_07860 CDS
T05219
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDO87_07860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sagu03021
]
CDO87_07860
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_07860
Enzymes [BR:
sagu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDO87_07860
Transcription machinery [BR:
sagu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDO87_07860
DNA repair and recombination proteins [BR:
sagu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDO87_07860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Glyco_hydro_65C
DUF4249
Motif
Other DBs
NCBI-ProteinID:
AUC53115
LinkDB
All DBs
Position
1613483..1614499
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEIKPGADPSKQATCVAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKQVALKMEVEGPKRLSVSAKGPGVVKAGDISE
SAGIEILNRDHVICHVDEGAEVYMEFTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
KVAYDVQPTREGQVLDYDKLTLKVETDGSVTPEDAIAYAARILQDQLSIFVNFEEPESAT
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKLEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattgggcagaattgatcaagccgacccagcttgagatcaagccgggc
gctgatccgtccaagcaggcgacctgcgtcgccgagccgctggagcggggctttggtctg
acacttggcaacgcactgcgtcgtgtgctgctgtcctcgctgcaaggcgcggccatcacc
tccgtgcagatcgacaacgtcctgcacgagttctcctcggttgcaggcgtgcgcgaggac
gtcaccgacatcatcctgaacctcaagcaggtcgccctgaagatggaagtagaagggccg
aagcgcctctccgtctccgcgaagggccccggcgtggtaaaggccggcgacatctccgaa
tccgccggcatcgagatcctcaaccgtgaccatgtcatctgccacgtcgacgaaggcgcg
gaagtgtacatggaattcaccgtgaacacgggcaagggctacgtcagcgccgacaagaac
aagccggaagacgcacccatcggcctgatcccgatcgacgccatctattcgccggtcaag
aaggtcgcctacgacgttcagccgacccgcgaaggccaggttctggactacgacaagctg
acgctgaaggtggaaaccgacggttccgtcacgccggaagacgcgattgcctacgcggcg
cgcatcctgcaggaccagctgtcgatcttcgtcaacttcgaagagcccgagtcggccacc
cgccaggacgacgacgacggtctggagttcaacccgctgctgctgaagaaggtcgacgag
ctggagctctcggtccgttcggcaaactgcctgaagaacgacaacatcgtctacatcggc
gacctgatccagaaaaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctgtccggtatgggtctgcacctcggcatggacgtcgag
gactggccgccggacaacatcgaggatctggccaagaagctggaagactcgttctga
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