Sagittula sp. P11: CDO87_09770
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Entry
CDO87_09770 CDS
T05219
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDO87_09770 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagu03019
]
CDO87_09770 (recQ)
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_09770 (recQ)
Enzymes [BR:
sagu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDO87_09770 (recQ)
Messenger RNA biogenesis [BR:
sagu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CDO87_09770 (recQ)
DNA repair and recombination proteins [BR:
sagu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CDO87_09770 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
Motif
Other DBs
NCBI-ProteinID:
AUC53460
LinkDB
All DBs
Position
complement(1997765..1999825)
Genome browser
AA seq
686 aa
AA seq
DB search
MPRDTDGPSVQALLKDIFGFDAFRPGQGEIVEAVAAGENVLAIMPTGGGKSLCFQLPALV
RPGVTVVISPLIALMRDQVRGLREAGVAAGALTSGNTQEETDAVWDMLHAGELKLLYLAP
ERLAGAGTQRMLAEAGVSLIAVDEAHCVSQWGHDFRPDYLRIGELRRALGVPLAAFTATA
DVETQEEMVSRLFDGAAPRTFLRGFDRPNIHLAFQPKDGPRAQVLGFAGARRGQSGIVYC
GTRAKTEGIARALREDGHSACHYHGGMEADDRRHVEERFAREDGLIVCATVAFGMGVDKP
DIRWVAHADLPKSIESYYQEIGRAGRDGAPAETMTLYGPEDIRLRRTQIDEGMAPPERRQ
ADHGRLNALLGLAEALGCRRQALLAYFGETAEPCGNCDLCDTPPEVFDGTEAVRKALSAA
LRTQESFGAGHLIDILMGKDTDKITQRGHDALPTFGVGKDLSKGQWQAVFRQMMGRDLIR
PDAERHGALVMTDRALPILRGEERISLRKDVLSKAADRRPAVKALVSEEHAPMFSALKAK
RTALARDAQVPPYMIFPDRTLIEMAENRPATLDQMAAINGVGAKKLESYGRAFLEVLTGA
AEEVHPVRLRVAARGAGSVYDALLECQARLVRGADGTEKPLSCTASSLAKLAEARPDSEA
GIERLLGDKRAERFGAAFLDVLRAVD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgacaccgacggcccctccgttcaggcgcttctgaaggacattttcggcttt
gatgcctttcgccccggacagggcgagatcgtggaggccgtggcggcgggcgagaacgtg
ctggccatcatgccgacgggcgggggcaagtccctgtgtttccagttgcccgcgctggtg
cgaccgggggtgacggtggtcatctcgccgctgatcgcgctgatgcgggaccaggtgcgc
gggctgcgggaggccggcgttgccgcgggggcgctgacctccggcaacacgcaggaagag
accgacgcggtctgggacatgctgcacgcgggcgagctgaagcttctgtacctggcgccg
gaacggctggcgggggcgggcacgcagcggatgctggcggaggcgggcgtgtcgctgatc
gccgtggacgaggcgcattgcgtcagccagtggggccacgatttccgccccgactacctg
cggatcggcgagctgcggcgcgcgctgggggtgccgctggcggccttcaccgccacggcg
gacgtggagacgcaggaggagatggtcagccgcctgttcgacggcgcagcgccgcggacc
ttcctgcgcggcttcgaccggccgaacattcacctggcgttccagccgaaggacgggccg
cgggcgcaggtgctgggctttgccggcgcgcggcgcgggcagtcgggcatcgtctattgc
ggcacgcgggccaagaccgagggcatcgcgcgggcgctgcgcgaggacggccattcggcc
tgtcactatcacggcgggatggaggcggacgaccggcgccatgtcgaggagcgctttgcc
cgcgaggacggtctgatcgtctgcgcgacggtggccttcgggatgggggtcgacaagccg
gacatccgctgggttgcccatgcggacctgccgaagtcgatcgagtcctactaccaggag
atcggccgcgccgggcgggacggggcaccggcggagacgatgacgctttacgggccggag
gacatccggctgcggcgcacacagatcgacgagggcatggccccgccggagcggcggcag
gcggaccacggccggctgaacgcacttttggggctggcggaggcgctgggatgccggcgg
caggcgctgctggcgtatttcggcgagacggcggagccctgcggcaactgcgacctgtgc
gacacgccgcccgaggtcttcgacgggacggaggcggtgcgcaaggcgctgtccgctgcg
ctgaggacgcaggagagtttcggcgcgggccacctgatcgacatcctgatgggcaaggac
accgacaagatcacccagcgcgggcatgacgcgctgccgaccttcggcgtcggcaaggac
ctgtcgaagggccagtggcaggcggtgttccggcagatgatggggcgcgacctgatccgc
cccgatgcggagcggcacggcgcgctggtgatgaccgaccgcgccttgccgatcctgcgc
ggcgaggaacgtatttcgctgcgcaaggacgtgctgagcaaggccgccgaccggcgcccg
gcggtgaaggcgctggtgtcggaagaacacgcgcccatgttctcggcgctgaaggcgaag
cggacggcgctggcgcgtgacgcgcaggtgccgccctacatgatcttccccgaccgcacg
ctgatcgagatggcagagaaccggcccgccacgctggaccagatggcggcgatcaacggg
gtcggcgcgaagaagctggaaagctacgggcgcgccttcctcgaagtgctgaccggcgcg
gccgaagaggtgcatccggtgcggctgcgggtcgcggcgcgcggggcgggatcggtctat
gacgcgctgctggaatgtcaggcgcggctggtgcggggcgcggacgggacggagaaaccc
ttgtcctgtacggcgtcgtcgctggcgaagctggccgaggcgcggcccgacagcgaggcc
gggatcgaacggcttctgggcgacaagcgggcggagcggttcggcgccgcctttctggac
gtgctgcgcgccgtggactaa
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