Sagittula sp. P11: CDO87_09965
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Entry
CDO87_09965 CDS
T05219
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu00260
Glycine, serine and threonine metabolism
sagu00630
Glyoxylate and dicarboxylate metabolism
sagu00670
One carbon pool by folate
sagu00785
Lipoic acid metabolism
sagu01100
Metabolic pathways
sagu01110
Biosynthesis of secondary metabolites
sagu01200
Carbon metabolism
Module
sagu_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CDO87_09965 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CDO87_09965 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CDO87_09965 (gcvP)
00670 One carbon pool by folate
CDO87_09965 (gcvP)
Enzymes [BR:
sagu01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
CDO87_09965 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AUC53496
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Position
complement(2038835..2041678)
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AA seq
947 aa
AA seq
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MTYDPIDYLPYDFANRRHIGPSPEEMAQMFSALGVDDLDQLIAETVPEDIRWDGELDFGK
ALSERELIHRMREVAQKNKVLTSLIGQGYHGTITPPAIQRNILENPAWYTAYTPYQPEIS
QGRLEALLNFQTMICDLTGLEIANASLLDEATACAEAMTMAQRVAKSKAQTFFVDENCHP
QNIAVMKTRAEPLGIEVVVGAPEDLEADKVFGAIFQYPGTFGHVRDLSDQMSALHEAQAV
GIVSADPMALCLLKEPAAMGADIAVGSTQRFGVPVGYGGPHAAYMACKDDMKRAMPGRIV
GVSVDSHGNRAYRLSLQTREQHIRREKATSNVCTAQALLAVMASFYAVFHGPKGLRAIAQ
RIHRKTVRMVKGLEAAGFKVEPDVYFDTVTVDVGLLQRGVLQAAVQQGLNLRRVGKTKVG
ITLDERTRPQTIEAVWRAFGLVRKDDPAESEYRLPEDLVRTTPYLQHEVFHMNRAETEMM
RYMRRLADRDLALDRAMIPLGSCTMKLNAAVEMMPVSWREFSMIHPYAPKDQAKGYSELI
GDLSDKLCQITGYDAISMQPNSGAQGEYAGLLTIRDWQRARGEGQRNVCLIPVNAHGTNP
ASAQMVGWKVVAVKCDAKGSIDLDDFRAKAEKHSDALAACMITYPSTHGVFERTVKEVCA
ITHEHGGQVYIDGANMNAMVGLSRPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKAH
LAPHLPGDPNGGDGAVSAAAFGSPSLLPISWAYCLMMGGKGLTQATRVAILNANYIAKRL
DGAFDVLYRGDKGWVAHECILDVRPFEKSAGVTVEDIAKRLVDAGFHAPTMSWPVAGTLM
VEPTESETKAELDRFCDAMLAIREEIRAIETGAIDRDMNPLKMAPHTMEDLVRDWDRPYT
REQGCFPPGAFRVDKYWPPVNRVDNVYGDRHLICTCPPMEEIAEAAE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgatccgatcgactacctgccttacgacttcgccaaccggcgccatatcggc
ccttcgccggaagagatggcgcagatgttctcggccctcggtgtcgacgacctcgaccag
ctgatcgccgagacggtgcccgaggacatccgttgggatggtgaactggacttcggcaag
gcgctgtcggaacgcgagctgatccaccgcatgcgcgaggtcgcgcagaagaacaaggtg
ctgacctcgctgatcggtcagggctaccacggcacgatcacgcccccggcgatccagcgc
aacatcctcgagaacccggcgtggtacacggcttacacgccctaccagcccgagatatcg
cagggcaggctcgaggcgctcctgaacttccagaccatgatctgcgacctgaccgggctc
gagatcgccaacgcctcgcttctggacgaggcgaccgcctgcgccgaggcgatgaccatg
gcgcagcgcgtcgcgaagtcgaaggcgcagaccttcttcgtcgacgagaactgccacccg
cagaacatcgcggtgatgaagacccgcgcggaacccctgggcatcgaggtcgtcgtcggc
gcgccggaggacctggaggccgacaaggtgttcggcgcgatcttccagtacccgggcacc
ttcggccacgtgcgcgacctgagcgaccagatgtcggccctgcacgaggcgcaggccgtg
ggcatcgtcagcgccgatccgatggcgctctgcctgctgaaggagccggctgccatgggt
gccgacatcgccgtggggtcgacccagcggttcggcgtgcccgtgggctatggcggcccg
cacgccgcctacatggcctgcaaggacgacatgaagcgcgcgatgcccggtcggatcgtc
ggggtgtcggtggacagccacggcaaccgcgcctaccgcctgtcgctgcaaacccgggaa
cagcacatccgccgcgagaaggcgacgtcgaacgtctgcaccgcgcaggcgttgctggcg
gtcatggcctcgttctacgcggttttccatggaccgaagggcctgcgcgccatcgcccag
cggatccaccgcaagacggtgcggatggtgaaagggctggaagccgcgggcttcaaggtg
gagcccgacgtctacttcgacacggtgacggtggacgtgggtctcctgcagcgcggcgtc
ctgcaggcggcggtccagcagggcctgaacctgcgccgggtcggcaagaccaaggtgggc
atcacgctggacgaacgcacccgcccgcagaccatcgaagccgtctggcgcgccttcggc
cttgtccgcaaggatgacccggcagagtccgaataccgcctgccggaggacttggtgcgc
acgacgccctaccttcagcacgaggtcttccacatgaaccgggcggagaccgagatgatg
cgctacatgcgccgtctcgccgaccgcgacctcgctctggaccgcgcgatgatcccgctc
ggctcctgcaccatgaagctgaacgcggcggtcgagatgatgccggtgtcgtggcgcgaa
ttctcgatgatccacccctatgcgcccaaggatcaggcgaaggggtattcggaactgatc
ggcgacctcagcgacaaactgtgccagatcaccggctacgacgcgatctccatgcagccg
aactccggcgcgcagggggaatacgctggccttctgacgatccgcgactggcagcgcgcg
cggggcgaagggcagcgcaacgtctgcctgatcccggtcaacgcgcatggcaccaacccg
gcctcggcccagatggtcggctggaaggtcgtcgcggtgaagtgcgacgccaagggctcc
atcgacctcgacgatttccgcgccaaggcggaaaagcactccgacgcgctggcggcctgc
atgatcacctacccctccacccacggcgtgttcgagcgcacggtgaaggaggtctgcgcg
atcacccatgagcacggcgggcaggtctacatcgacggggcgaacatgaacgccatggtc
ggcctgtcgcggcccggcgatctgggcggcgacgtgagccacctgaacctgcacaagacc
ttctgcattccgcatggcggcggcggccccggcatgggtccgatcggcgtgaaggcgcac
ctcgcgccgcatctgccgggcgatccgaacggcggcgacggcgcggtcagcgcggcggcc
ttcggttcgccgtcgctgctgccgatctcatgggcgtattgcctgatgatgggcggcaag
ggcctgacgcaggcgacgcgcgtcgcgatcctgaacgcgaactacatcgccaagcggctg
gatggcgccttcgacgtgctttaccgcggcgacaagggctgggtcgcgcatgagtgcatc
ctcgacgtccgcccgttcgagaagagcgccggcgtcacggttgaggacattgccaagcgc
ctcgtcgatgccgggttccacgcgccgaccatgagctggccggtggcggggacgctgatg
gtggaaccgacggagtcggagaccaaggccgaactcgaccgcttctgcgacgcgatgctg
gcgatccgcgaggagatccgcgccatcgagaccggcgccatcgaccgcgacatgaacccg
ctgaagatggccccgcacacgatggaggacctcgtccgcgactgggaccgtccctacacg
cgcgaacagggctgcttccctccgggggctttccgggtcgacaagtactggccgccggtc
aaccgcgtcgacaacgtttatggcgaccgccacctgatctgcacctgcccgccgatggaa
gagatcgccgaggcggcggagtag
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