Sagittula sp. P11: CDO87_10175
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Entry
CDO87_10175 CDS
T05219
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sagu
Sagittula sp. P11
Pathway
sagu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CDO87_10175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_10175
DNA repair and recombination proteins [BR:
sagu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CDO87_10175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AUC53535
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Position
2084273..2086906
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AA seq
877 aa
AA seq
DB search
MSNVTPMMAQYLEIKAQYPDALLFYRMGDFYEMFFDDAVAASEALDIALTKRGKHDGDDI
PMCGVPVHAAEGYLLTLIRKGFRVAVGEQLESPEEAKKRGYKAVVKRDVVRLVTPGTLTE
DTLLEARRHNFLCALGNVRDEWALAWTDISTGAFHVMPLGQARIGAELARLAPSEVLVSD
KVDETLREVLGDLGIEATVLGAASFESGAAEQRLCSTFAVQTLAGFGSFSRAELSAMGAL
VDYLDITQKGRLPLLQTPKQEAGARLMQIDAATRRNLELTSAMSGGRAGSLLAVIDRTVT
SGGARLLERRVSSPSRDLAVIGERLEAVRWGVEGSFSDGLRELLRRVPDVERALSRLGLD
RGGPRDLTAVRSALTQAETIRDRLEGVELPALLGRSRDALAGHEALLELLDAALVAEPPL
RVSDGGFIAPGYDEALDQARTLRDEGRGVIARMQGEYAEETGIGSLKIKHNNVLGYFIEV
ATTHADKMHARSDRFIHRQTTANQVRFTTTELSELETRILNAGAEASEIEKRLYDALRRE
ILDRAGVLSELAFSLAEFDLALGLAELARQRDWCLPKVDDSRAFDIEAGRHPVVEAALQK
AGEPFIANDCALSAEGDAASVRLLTGPNMAGKSTYLRQNALIALLAQIGSYVPARSAHIG
VVSQIFSRVGASDDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATYDGLSIA
WATLEHLHEVNRVRGLFATHYHELTVLAGKLPGVKNATVAVKEWEGDVIFLHEVHDGAAD
RSYGVQVAQLAGLPKAVITRARDVLEALEKGERERASPKALIDDLPLFSAAAKAPAPAVS
RETPSAVEEQLAAIIPDEMSPREALQVLYDLKALVKG
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgtcacaccgatgatggcacaatatctggagatcaaggcgcagtaccctgac
gcgctgctgttctaccggatgggtgacttctacgagatgttctttgacgacgcggtggcg
gcgtccgaggcgctggacatcgccctgacgaaacgcggcaagcacgacggcgacgacatc
ccgatgtgcggcgtcccggtgcacgcggcggagggctatctgctgacgctgatccgcaag
ggattccgcgtcgcggtgggcgaacagctcgaaagccccgaagaggcgaagaagcgcggc
tacaaggcggtggtaaagcgcgacgtggtgcggctggtgacgccgggcacgctgacggag
gacacgctgctggaggcgcggcggcacaatttcctgtgcgctttgggcaatgtcagagac
gaatgggcgctggcgtggaccgatatctccaccggcgcgtttcacgtgatgccgctggga
caggcacggatcggcgcggaactggcgcggctcgccccctcggaggtgctggtctcggac
aaggtggacgagaccttgcgcgaggtgctgggcgatctggggatcgaggcgacggtgctg
ggcgcggcgtccttcgagtcgggcgcggcagagcaacgcctgtgcagcacctttgcggtg
cagaccctggcggggttcgggtcgttttcccgggcggaactgtccgccatgggcgcgctg
gtcgattatctcgacatcacgcaaaagggccggttgccgctgctgcagaccccgaagcag
gaggccggcgcacggctgatgcagatcgacgccgcgacgcgccggaacctcgaactgacc
tctgccatgtcgggcgggcgggccggatcgctgctggcggtgatcgaccggacggtgaca
tcgggcggggcgcggttgctggaacggcgggtctcctcgccttcgcgcgaccttgcagtg
atcggcgagcgcctggaagcggtgcgctggggtgtcgaagggtcgttctccgacgggctg
cgcgagctgctgcggcgcgtgccggacgtggagcgtgcgctgtcgcggctgggtctggac
cggggcgggccgcgcgacctgaccgccgtgcgcagcgccctgactcaagcggagacgata
cgcgaccggctggagggcgtggaacttccagcgcttttggggcggagtagagacgcattg
gccggtcacgaggctctgctggaactgctggatgccgcgctggtggcggagccgccgctg
cgggtgtccgatggcgggttcatcgcgccgggctacgacgaggcgctggaccaggcgcgg
accctgcgggatgagggcaggggcgtgatcgcccggatgcagggggaatacgccgaggaa
accgggatcgggtcgctgaagatcaagcacaacaacgtgctgggctatttcatcgaggtg
gcgaccacccatgccgacaagatgcacgcccgcagcgaccggttcatccatcgtcagaca
accgccaaccaggtgcgctttaccaccactgaactgtcagagctggaaacgcgcatcctg
aacgccggggcggaggcgtcggagatcgaaaagcggctctatgacgccttgagacgcgag
attctggatcgggcaggggtgttgtccgagctggcgttttcgctggccgagttcgatctt
gcgctggggcttgcggaactggcgcggcaacgggactggtgcctgccgaaggtcgacgac
agtcgcgccttcgatatcgaagcgggacggcatccggtcgtggaggcggcgctgcagaag
gccggtgagccgttcatcgccaacgactgcgcgctgagcgccgagggggatgccgcttcg
gtccggctgctgaccggtccgaacatggccggtaagtcgacctatctcaggcagaacgcg
ctgatcgcgctgctggcgcagatcgggtcctatgttccggcgcgttcggctcacatcggg
gtggtcagccagatcttcagccgggtcggagcctctgacgatctggcgcgcgggcggtcg
accttcatggtcgagatggtggaaaccgccgcgatcctgaaccaggcggacgaccgggcg
ctggtgatcctcgatgagatcggacgcggcacggccacttatgacgggctgagcatcgcc
tgggcgacgctggagcatctgcatgaggtcaaccgcgtgcgcgggctgtttgccacgcac
taccacgaactgaccgttctggccggaaagctgccgggcgtgaagaacgccaccgtggcg
gtgaaggagtgggagggcgatgtcatcttcctgcacgaggtgcatgacggtgcagccgac
cggtcctacggtgtgcaggtggcgcaactggccggactgcccaaggcggtcatcacaagg
gcccgggacgtgctggaagcgctggagaagggggagcgggaacgcgcctcgcccaaggcg
ctgatcgacgacctgccgctgttctctgccgcggcgaaggcaccggcacccgctgtttca
cgggaaacaccctcggcggtcgaggagcaacttgcggcgatcatcccggatgagatgtcg
ccgcgagaagccctgcaagtgctctacgacctcaaggcgctcgtaaaggggtga
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