Sagittula sp. P11: CDO87_11865
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Entry
CDO87_11865 CDS
T05219
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDO87_11865 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagu03019
]
CDO87_11865 (groL)
03110 Chaperones and folding catalysts [BR:
sagu03110
]
CDO87_11865 (groL)
03029 Mitochondrial biogenesis [BR:
sagu03029
]
CDO87_11865 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sagu04147
]
CDO87_11865 (groL)
Enzymes [BR:
sagu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CDO87_11865 (groL)
Messenger RNA biogenesis [BR:
sagu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CDO87_11865 (groL)
Chaperones and folding catalysts [BR:
sagu03110
]
Heat shock proteins
HSP60 / Chaperonin
CDO87_11865 (groL)
Mitochondrial biogenesis [BR:
sagu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CDO87_11865 (groL)
Exosome [BR:
sagu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CDO87_11865 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CDO87_11865 (groL)
Exosomal proteins of breast cancer cells
CDO87_11865 (groL)
Exosomal proteins of colorectal cancer cells
CDO87_11865 (groL)
Exosomal proteins of bladder cancer cells
CDO87_11865 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AUC53833
LinkDB
All DBs
Position
2464425..2466068
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKDVKFNTDARSKMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGMKAVAAGMNPMDLKRGI
DMATAKVVEHIKNAARTVENSDEVAQVGTISANGEAEIGRQIADAMQKVGNEGVITVEEN
KGLETETDVVEGMQFDRGYLSPYFVTNADKMIAELEDCMILLHEKKLSSLQPMVPLLEQV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLESVTMDMLGNAKKVSITKDETTIVDGAGQKSEIEARVSQIRTQIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGVVVGGGVALV
QGAKALDGLEGQNADQNRGISIVRIALEAPLRQIAQNAGVDGSVVAGKVRESTDLKFGYN
AQTDEYGDMFKFGVIDPAKVVRTALEDASSIAGLLITTEAMVADKPQKEGAGAGAGMPDM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaaagacgtgaaattcaacaccgacgcccgcagcaagatgctgaagggtgtg
aacatcctcgccgacgccgtgaaggtgacgcttggcccgaaaggccggaacgtggttctg
gacaaatccttcggcgcgccgcgcatcaccaaggacggtgtgtccgtggccaaggaaatc
gaactggaagacaagttcgagaacatgggcgcgcagatggtgaaggaagttgcttcccgc
accaacgacgaagccggtgacggcaccaccaccgcgaccgttctggcccaggccatcgtc
aaggaaggcatgaaggccgttgcagccggcatgaacccgatggacctgaagcgcggcatc
gacatggcaaccgccaaggtcgtcgagcacatcaagaacgcggcccgcaccgtcgagaac
tccgacgaggtcgcacaggtcggcaccatctccgcgaacggcgaggccgagatcggccgt
cagatcgccgacgcgatgcagaaggtcggcaacgagggtgtcatcaccgtcgaagagaac
aagggcctcgagaccgagaccgatgtcgtcgaaggcatgcagttcgaccgcggctacctg
agcccctacttcgtgaccaacgcagacaagatgatcgcagaactcgaagactgcatgatc
ctgctgcacgagaagaagctctcctcgctccagccgatggttccgctgctcgagcaggtg
atccagtcgcagaagccgctgctgatcatcgcggaagacgtggaaggcgaagcgctggcg
accctcgtggtcaacaagctgcgtggcggcctgaagatcgcagccgtgaaggcaccgggc
ttcggcgaccgtcgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggtg
atctccgaagacctcggcatgaagctcgagtcggtgaccatggacatgcttggcaacgcc
aagaaggtctccatcaccaaggacgagaccaccatcgtcgacggcgctggccagaagtcc
gagatcgaggcacgcgtttcccagatccgtacgcagatcgaagagaccacctccgactac
gaccgtgaaaagctgcaggaacgcgttgccaagctggcaggcggtgtggctgtcatccgc
gtcggcggcatgaccgaagtcgaagtgaaagagcgcaaggaccgcgtggacgacgctctg
aacgcgacccgcgcagccgtgcaggaaggcgttgtcgtcggtggcggcgtggcgctggtg
cagggtgcgaaggcgctggacggtctggaaggtcagaacgccgaccagaaccgcggcatc
tccatcgtgcgcatcgcactggaagcgccgctgcgtcagatcgcgcagaacgcgggtgtc
gacggctccgtggtggctggcaaggtccgtgaatcgaccgacctgaagttcggctacaac
gcgcagaccgacgagtacggcgacatgttcaagttcggcgtcatcgacccggcgaaagtc
gtccgcaccgcgctggaagacgcatcttcgatcgcaggcctgctgatcaccaccgaagcg
atggtggccgacaagccgcagaaagaaggcgcaggcgccggcgcaggcatgcccgacatg
ggcggcatgggcggcatgatgtaa
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