Sagittula sp. P11: CDO87_12180
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Entry
CDO87_12180 CDS
T05219
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu00330
Arginine and proline metabolism
sagu01100
Metabolic pathways
sagu01110
Biosynthesis of secondary metabolites
Module
sagu_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CDO87_12180
Enzymes [BR:
sagu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
CDO87_12180
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
WHH
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AUC53892
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All DBs
Position
2530453..2532738
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AA seq
761 aa
AA seq
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MKFRFPIVIIDEDFRSENTSGLGIRALAQAIESEGFEVLGVTSYGDLSQFAQQQSRASAF
VLSIDDEEFTPGPDLDPAVLNLRKFIEEVRWKNADVPIYVYGETKTSRHLPNDILRELHG
FIHMFEDTPEFVAKHIIREAKSYLEYIQPPFFKELLDYAEDGSYSWHCPGHSGGVAFLKS
PIGQMYHQFYGENMLRADVCNAVEELGQLLDHNGAIGESEKNAARIFNADHCFFVTNGTS
TSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAIPVFLKPTRNHWGIIGPIQRSEFE
PEAIKAKIRANPLLEGVDPETVKPRILTLTQSTYDGVLYNTEVIKGMLDGWIENLHFDEA
WLPHAAFHPFYGTYHAMGRKRERSKKSVTYVTQSVHKLLAGISQASHVLVQDSEETKLDR
HLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESLDEALDFRRAMRKVDEEF
GNDWWFQVWGPDTLAEEGIGRAKDWELKKTDSEGVESSGEDAWHGFGDMARGFNMLDPIK
ATIITPGLNIDGLFSDEGIPASIVSKYLTEHGVVVEKTGLYSFFIMFTIGITKGRWNTLL
AALQQFKDDYDRNNPLWRVMPEFCAAQRRYEKMGLKDLCQHVHTMYAKYDVARLSTEIYL
SDHHPAMTPSEAFSHIARRTTQRVPIDELEGRVTTSLVTPYPPGIPLLIPGEVFNAKIVD
YLRFNRDFARECPGFETDIHGLVQEVGENGVVHYFADCVAE
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgctttcccatcgtcatcatcgacgaggatttccgatccgaaaacacatcc
ggccttggcatccgcgccttggcccaagccattgaaagcgaagggttcgaggtgctcggc
gtcaccagctacggtgacctgagccagttcgcccagcagcaaagccgcgcctctgcgttc
gtgttgtccatcgacgacgaggaattcacccccgggcccgatctggacccggctgtgctg
aacctgcgcaagttcatcgaggaagtgcgctggaagaatgccgacgtgccgatctacgtc
tatggcgaaaccaagacctcgcgccatttgccaaacgacatcctgcgtgagctgcacggc
ttcatccacatgttcgaggacacgccggagttcgtggccaagcacatcatccgcgaggcg
aaaagctacctcgaatacatccagccgccattcttcaaggagcttctggattacgccgag
gacgggtcctactcgtggcactgccctgggcactcgggcggcgtggcgttcctgaagtcg
cccatcgggcagatgtaccaccagttctacggcgagaacatgctgcgcgccgacgtgtgc
aacgcggtggaggagctgggccagcttctggaccacaacggggccatcggcgagtcggag
aagaacgcggcgcggatcttcaacgccgaccactgcttcttcgtgaccaatggcacctcg
acctcgaacaagatggtctggcaccataccgttgcgccgggcgacgtggtggtggtggac
cgcaactgccacaagtcgatcctgcactcgatcatcatgactggcgcgatcccggtcttc
ctgaagcccacccgcaaccactggggcatcatcggaccgatccagcggtcggagttcgag
ccggaggcgatcaaggccaagatccgcgccaacccgctgctggaaggcgtcgacccggag
acggtcaagccgcgcatcctgaccctgacccaatcgacctatgacggcgtgctttacaac
accgaggtcatcaagggcatgctggacggctggatcgagaacctgcatttcgacgaggcc
tggctgccgcacgcggccttccacccgttctacggcacctatcacgccatggggcgcaag
cgggaacgcagcaagaaatcggtgacctacgtcacgcagtcggtgcacaagctgctggcc
gggatttcgcaggcgagccacgttttggtgcaggacagcgaagagacgaagctggaccgc
catctgttcaacgaggcgtacctgatgcacacctcgacctcgccgcagtattcgatcatc
gcgtcctgcgacgtggctgcagcgatgatggagcctccgggcggcaccgcgctggtggag
gagagcctcgacgaggcgctcgatttccgccgggcgatgcgcaaggtcgacgaggagttc
ggcaacgactggtggttccaggtctgggggccggacacgctggccgaggaaggcatcggc
cgcgccaaggactgggagctgaagaagaccgacagcgagggcgtcgaaagttcgggcgag
gatgcgtggcacggctttggcgacatggcccgcgggttcaacatgctcgacccgatcaag
gcgacgatcatcacgccgggcctgaacatcgacggtctgttctcggacgagggcatcccg
gcctccatcgtgtcgaagtacctgaccgaacatggcgtcgtggtcgagaagaccgggctt
tattccttcttcatcatgttcaccatcggcatcaccaagggccggtggaatacgcttctg
gcggcgttgcagcagttcaaggacgactacgaccggaacaacccgctgtggcgcgtcatg
ccggagttctgcgccgcacagcgccggtacgagaagatgggcctgaaggacctctgccag
cacgtacacacgatgtatgcaaagtatgacgtggcccgcctgtcgacggagatctacctg
agcgaccaccacccggcgatgaccccgtccgaggcgttctcgcacatcgcgcgccgcacg
acccagcgcgtgccgatcgacgagctggagggccgcgtgaccacgtcgctggtgacgccg
tacccgccgggtatcccgcttttgatcccgggcgaggtcttcaacgccaagatcgtggac
tacctgcgcttcaaccgggacttcgcacgcgaatgcccggggttcgagaccgacatccac
gggctggtgcaggaggtgggcgagaacggtgtcgtccactacttcgcggactgcgtcgcc
gaatag
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