Sagittula sp. P11: CDO87_16035
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Entry
CDO87_16035 CDS
T05219
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sagu
Sagittula sp. P11
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagu03032
]
CDO87_16035 (topA)
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_16035 (topA)
Enzymes [BR:
sagu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CDO87_16035 (topA)
DNA replication proteins [BR:
sagu03032
]
Prokaryotic type
DNA Topoisomerases
CDO87_16035 (topA)
DNA repair and recombination proteins [BR:
sagu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDO87_16035 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AUC54588
LinkDB
All DBs
Position
3305512..3308196
Genome browser
AA seq
894 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPPKDGSVDTEHDFEMTWEVANDSRK
HVAAIAEALKTDDKLILATDPDREGEAISWHLKEALTKRRSIKKTTEVSRVTFNAITKAA
VTEAMKNPRDIDAPLVEAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVCLRLIVE
REMEIEAFNPREYWQVKAQLATPRGQTFDARLVSLAGKKLDRYDLENATQAEMAVDAVAK
RSLKVLSVEAKPASRNPSAPFMTSTLQQEASRKFGMGAKAAMNAAQRLYEAGHITYMRTD
GIDMAPEAVSACRDAIAERYGKDYVPSSPRVYKNKAKNAQEAHECIRPTDMTKDAESLRL
SESDQRKLYDLIWKRTLACQMEAARMERTTVEIGSDDGQVGLRATGQVVLFDGFLKVYEE
GRDEPVEDDDKRLPQIMQGEPAKFDAGALKSEHAKAMEKGTDRGLPAVLSGDGATLGTQS
FTNPPPRYTEATLVKKMEELGIGRPSTYASVITTIQDREYVRKEQNRLFPEDKGRIVTIF
LLNFFKRYVEYDFTAALEDELDQVSAGAEDYKELLAKFWRDFSAAIAETSDLRISEVLDV
LDEALAPQLYPPREDGSDPRICPKCGQGRLHLKTSRTGGFVGCGNYPECTYTRPIAGEGA
EGEERLLGEDQGDEIWLKAGRFGPYVQRGEPTPENKKPPRASLPKKGGQFLPGWDPADMT
LEKALTLLTMPREVGMHPDGGVVSANLGRFGPYIMHQLPDEEKPVYVNLKEFQEVFEIGM
NHAVELLAQKRANPGRGRQTAKALRDMGEHPDGGKISIMEGRYGPYVKWEKVNATLPKDV
EPADVTMETVLELIAAKAKKKPAKKAAAKSTATKSTTKKTAAKKPAAKKAAKKD
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgtcgtcgaatcgcccgccaaggccaagacaatcaacaagtatctggga
tccgactacacggttctggcgtcttacggtcacgtgagggacctgcctccgaaggatggc
tcggtcgataccgaacatgatttcgagatgacgtgggaggtcgcgaacgattcgcgcaaa
cacgtcgctgccatcgccgaagccctgaaaaccgacgacaagctgatcctcgcaactgac
cccgatcgtgagggggaggcgatctcgtggcatctgaaggaggcactgacgaagcgccgt
tcgatcaagaagacgacagaggtcagccgggtcacattcaacgccatcaccaaggccgcc
gtgaccgaggcgatgaagaacccccgcgacatcgacgcgccgctggtggaggcgtatctc
gcccgccgtgccctcgactacctcgtgggcttcaacctgtcgccggtgctgtggcgcaag
ctgcccggcgcgcggtcggccggtcgtgtgcagtccgtctgcctccgcctgatcgtcgag
cgcgagatggagatcgaggcgttcaatccccgcgaatactggcaggtgaaggcacaactc
gcgacgccgcgcggccagacgttcgacgcccggctggtcagcctcgccggcaagaagctc
gaccgctacgacctcgaaaacgccactcaggccgagatggcggtggatgccgtcgccaag
cgcagcctgaaggttctgagcgtcgaggcgaagcccgcctcgcgcaacccgtcggcgccg
ttcatgacctccaccctccagcaagaggcgagccgcaagttcggcatgggcgccaaggcg
gcgatgaacgcggcccagcggctctacgaggccgggcacatcacatacatgcggacggac
ggcatcgacatggcgccggaagccgtcagcgcctgccgcgacgccatcgcggagcgctac
ggcaaggattacgtgccgtcctcgccgcgggtctacaagaacaaggcgaagaacgcgcag
gaagcgcacgagtgcatccgaccgaccgacatgacgaaggacgccgagagcctgcgcctg
tccgaatccgaccagcgcaagctgtatgacctgatctggaagcgcacgctcgcctgccag
atggaggccgcccggatggagcggaccacggtcgagatcggctctgacgacgggcaggtc
ggtctgcgcgccaccggccaggtggtgctcttcgacgggttcctgaaggtctacgaagag
gggcgtgacgagccggtcgaggatgacgacaagcgcctgccgcagatcatgcagggcgag
ccggcgaagttcgacgcgggcgcgctcaagtccgagcacgcgaaggcgatggagaagggc
accgaccgcggtctgcccgcggtgctgtccggcgacggcgcgactcttggcacgcagagc
ttcactaacccgccgccgcgctacaccgaggcgacgctggtcaagaagatggaggaactc
ggcatcgggcgaccctccacctatgcctccgtcatcacgacgatccaggatcgcgaatat
gtccgcaaggaacagaaccgtctgttcccggaggacaagggccggatcgtgacgatcttt
ctgctgaacttcttcaagcgctacgtggagtacgacttcaccgcagcgctggaggacgag
ctggaccaggtcagcgcaggtgccgaggactacaaggaactgctcgctaagttctggcgc
gacttcagcgcggccatcgccgagacgtccgacctgcggatctcggaggttctggacgtg
ctggacgaggcgcttgcgccccagctttacccgccgcgtgaggacgggagcgatccgcgc
atctgtccgaagtgcgggcagggacggctgcacctgaagacctcgcgcaccggcggattc
gtcggctgcggcaactaccccgaatgcacctacacgcgccccatcgcgggcgagggcgcc
gagggcgaggagcgtctgctgggcgaggatcagggcgacgagatctggctgaaggccggg
cgcttcggcccctacgtgcagcgcggggaacccacgccggagaacaagaaaccgccgcgt
gcgtccctgcccaagaagggcggccagttcctgccgggctgggatccggcggacatgacg
ctggagaaggcgctgacgctgctgaccatgccgcgcgaagtggggatgcaccctgatggc
ggcgtcgtgagtgcgaacctcgggcgcttcggtccctacatcatgcaccagctcccggac
gaggagaaaccggtctacgtgaacctcaaggagttccaggaggtcttcgagatcggcatg
aaccacgccgtcgaactgctggcgcagaagcgggcgaaccccggccgcggacgtcagacg
gccaaggcgctgcgcgacatgggcgagcatcccgatggcggcaagatctccatcatggag
ggccgctacggtccctatgtaaagtgggagaaggtcaatgccacgctgccgaaggacgtg
gagcctgcggacgtgacaatggaaaccgtgctggaactgatcgccgcgaaggcgaagaag
aaaccggcgaagaaggccgcggccaaatcgaccgccacaaagtcgaccacgaagaagacc
gccgcaaagaagccggcggccaagaaggcggcgaagaaagactga
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