Sagittula sp. P11: CDO87_18380
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Entry
CDO87_18380 CDS
T05219
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
sagu
Sagittula sp. P11
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sagu03009
]
CDO87_18380
Ribosome biogenesis [BR:
sagu03009
]
Prokaryotic type
GTPases
CDO87_18380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
Roc
Ras
MeaB
Arf
AAA_22
ABC_tran
Septin
TniB
MnmE_helical
Motif
Other DBs
NCBI-ProteinID:
AUC55013
LinkDB
All DBs
Position
3807357..3808823
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AA seq
488 aa
AA seq
DB search
MSFSLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGEAKLGDLRFTVIDTAGL
ENANDDSLPARMRRLTERAVDMADVCLFLIDARAGLLPDDHVFAEILRKRAKHVILAANK
AEGSAADAGVFEAFELGLGEPIRLSAEHGEGMPELYSVLAPLADGYEEERADDAPEVDVA
VSEDDEDDDSVPVPTRARPLQIAVVGRPNAGKSTLINQIIGEDRLLTGPEAGITRDAISL
THEWGGVPMRIFDTAGMRRRAKVQEKLEKLSVSDGIRAVKFAEVVVVLLDAAIPFETQDL
KIADLAEREGRAVVVAVNKWDIEGEKQEKLKWLREQFEHVLPQLRGAPLVTVSARTGKGL
DKLQEAVMKAYTVWNRRVSTGQLNRWLEGMISRHPPPAPQGRRIKLRYMTQAKTRPPGFV
VMCSHPDKLPESYSRYLVNGLREDFDMPGTPIRLHMRGQGDKNPYKGRRTKNAGALKKHL
GSLQKKKD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccctcgccatcgtcggacgccccaatgtgggcaagtcgaccctgttcaac
cgtctcgtcggcaagcggctggcgctggtcgacgaccagcctggcgtgacccgcgacctg
cgggagggcgaggcgaagctgggcgacctgcggttcaccgtgatcgacacggcgggcctt
gagaacgccaacgacgattcccttccggcacggatgcggcgcctgaccgagcgggcggtg
gacatggcggatgtctgcctgttcctgatcgacgcgcgggcgggcctgctgccggacgac
cacgtctttgccgagatcctgcgcaagcgcgccaagcacgtcatcctcgcggccaacaag
gccgagggctctgccgccgacgccggtgtgttcgaggccttcgagctgggtctgggcgag
ccgatccgcctgtcggcggagcacggcgaggggatgccggagctctactcggtgctggcg
ccgctggcggacgggtacgaggaggagcgcgccgacgacgcgccggaggtggatgtcgcc
gtctccgaagacgacgaggacgacgacagcgtgccggttccgacccgcgcgcggcccctg
cagatcgccgttgtggggcgcccgaacgcgggcaagtcgacgctgatcaaccagatcatc
ggcgaggaccggctgctgaccgggcccgaggcggggatcacccgcgacgccatctctctg
acccacgagtggggcggtgtgccgatgcggatcttcgacaccgcgggcatgcgccgccgg
gcgaaggtgcaggagaagcttgagaagctgtcggtctctgacggcatccgggcggtgaag
ttcgccgaggtggtggtcgtgctgctggatgcggccatcccgttcgagacgcaggacctg
aagatcgccgaccttgcggagcgcgaggggcgtgccgtggtcgtggcggtcaacaagtgg
gacatcgagggcgagaagcaggaaaagctgaagtggctgcgcgagcagttcgagcatgtc
ctgccgcagctccgcggcgcgccgctggtgacggtctcggcccggacgggcaaggggctg
gacaagctgcaggaagcggtgatgaaggcctacacggtctggaatcgccgcgtgtcgacc
gggcagctcaaccgctggctcgagggcatgatctcgcgccatccgcccccggcgccgcag
ggccgccggatcaagctgcgctacatgacgcaggcgaagacccggccgccgggcttcgtg
gtgatgtgctcgcatcccgacaagctgcctgaaagctattcgcgctacctggtgaacggg
ctgcgcgaggacttcgacatgccgggcacgccgatccgtctgcacatgcgcgggcagggc
gacaagaacccctacaagggccgccggacgaagaacgcgggggcgctgaagaagcacctc
gggtcgcttcagaagaagaaggactga
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