Sagittula sp. P11: CDO87_21545
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Entry
CDO87_21545 CDS
T05219
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sagu
Sagittula sp. P11
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sagu03016
]
CDO87_21545 (rnd)
Enzymes [BR:
sagu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CDO87_21545 (rnd)
Transfer RNA biogenesis [BR:
sagu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CDO87_21545 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
KI67R
Motif
Other DBs
NCBI-ProteinID:
AUC55582
LinkDB
All DBs
Position
complement(4517456..4518613)
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AA seq
385 aa
AA seq
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MQTLTTTEELSDFCARAKGQPYITVDTEFLRERTYYSKLCLIQLALPGKGDEDAVLVDPM
VDGLSLDPLLDLFRDESIVKVFHAARQDLEIFYIDHGVIPQPLFDTQVAAMVCGFGEQVG
YETLVKRIAKQQLDKSSRFTDWSRRPLTDAQKSYALADVTHLRQIYEFLAGKLEESGRAR
WVAEELGVLTDPETYITRPRDAWQRVKTRSNAPRFLAIVRELAAFRETYAQERNIPRNRV
FKDDALVELASTKPMSANDLSRSRLLLREARKGPIADGILEAVKAGVECPKDDLPEADTV
RDKLQVNPALADLLRVLLKAKTERFGVASKLIAPATDLDAIAAGMRDVPALSGWRREVFG
EDALRLCSGQIALAARGKNVDVIEL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcagacattgacgacgaccgaagagctttccgatttctgtgcccgtgccaagggccag
ccgtacatcaccgtcgatacggagttcctccgtgaacggacctattattccaagctgtgc
ctgatccagcttgcgctgcccggcaagggtgacgaggacgccgtgctggtcgatccgatg
gtggacgggctgtcgctggaccctctgctggacctcttccgcgacgagagcatcgtgaag
gtgttccacgccgcccggcaggatctggagatcttctacatcgatcacggggtcatcccg
cagccgctgttcgacacgcaggtggccgccatggtctgcggtttcggcgagcaggtcggc
tacgagacgctggtcaagcgcatcgccaagcaacagctcgacaagtcctcgcgcttcacc
gactggtcgcgccgcccgctgacggacgcgcagaagtcctacgcgctggccgatgtgacg
cacctgcgccagatctacgaattcctcgcgggcaagctggaggaaagcggacgggcgcgc
tgggtcgccgaggaactgggcgtcctgaccgatccggaaacctacatcacccgcccgcgc
gacgcttggcagcgggtgaagacacggtccaacgcgccgcgcttccttgccatcgtgcgt
gaactggcggccttccgcgaaacctacgcgcaggagcgcaacatcccgcgcaaccgcgtg
ttcaaggacgacgcgctggtcgagctggcctcgaccaagccgatgtcggccaatgacctg
tcgcgttcgcgcctgctgctgcgcgaggcccgcaagggccccatcgccgacggcatcctc
gaagcggtcaaggccggggtggaatgccccaaggacgacctgcccgaagccgacaccgtg
cgcgacaagctgcaggtgaacccggcgctggcggatcttctgcgcgtgctgctgaaggcc
aagacggagcgtttcggtgtggcctccaagctgatcgccccggcgaccgacctcgacgcc
atcgcggcggggatgcgcgacgtgccggcgctgtccggctggcggcgcgaagtcttcggc
gaggatgcgctgcgtctgtgctccggccagatcgcgctggcagcacggggcaagaacgtc
gacgtcatcgaactctga
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