Sagittula sp. P11: CDO87_23385
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Entry
CDO87_23385 CDS
T05219
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
sagu
Sagittula sp. P11
Pathway
sagu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDO87_23385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sagu02000
]
CDO87_23385
Transporters [BR:
sagu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CDO87_23385
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AUC56231
LinkDB
All DBs
Position
unnamed1:complement(301970..303031)
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AA seq
353 aa
AA seq
DB search
MTKNDRSRLNRRSMLAIGTAALAAPMLGRRANAQTASLTVADPGGPFSAGFSKAFYEPFT
AETGIEIVSVARDAEPTAQFKSIVETGSYIWDVCTLTLSARLILEQEDLLDDIQLDPALA
ETMMPGSVHSNFLGTDVYATISAFNTDRMEAGPSNWAEFWDTETFAGRRALRRNPIDTLE
QALMADGVAPEDLYPLDVDRAFAKLDEIKDHIDVWWTGGAQSSQLLQSGEVDMVAGWNAR
LQSAIDAGAPAELVWNQGLYSIEGWGLPKGGPNVDAARQFLAFCARPEQQALFTDDLSYG
PTNLAAYDHISEERAPVLTTAPANLDKMVLADESWWEENRAEMTERFNLWLLM
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaacgacagatcgcgcctgaaccgtcgcagcatgctggccatcggcactgcc
gcgctggcagccccgatgctgggccgccgtgccaatgcgcagaccgcgtcgctgaccgtg
gccgatccgggcggtccgttcagcgcgggcttcagcaaggccttctacgagcccttcacc
gccgagaccggcatcgagatcgtttccgtggcgcgagacgcggaacccacggcgcagttc
aagtccatcgtcgagaccggcagctacatctgggacgtttgtaccctgaccctgtcggcc
cggctgatccttgaacaggaagatctgctggacgacatccaactcgatccggcgctggcc
gaaaccatgatgccgggctcggtgcattcgaacttcctcggcaccgatgtctacgcgacg
atatcggcgttcaacaccgacaggatggaagccggtccgtccaactgggccgagttctgg
gacacggaaaccttcgccgggcgtcgcgcgctgcgccgcaatcccatcgacactctggag
caggcgctgatggccgacggtgtcgcgcccgaggatctttacccgctcgacgtggaccgc
gcctttgccaagcttgacgagatcaaggaccacatcgacgtatggtggaccggcggtgcg
caatcctcgcaactgctgcagagtggcgaggtcgacatggtggccggctggaacgcccgc
ctgcaatcggccatcgacgccggggcgcccgctgaactggtctggaaccagggtctttac
tcgatcgagggctggggccttcccaagggcggcccgaacgtcgatgccgcacggcagttc
ctggccttctgcgcccggcccgagcagcaggcgctgttcaccgatgatctgtcctatggc
ccgaccaacctcgcggcttacgaccacatctcggaagagcgcgcgcccgttctgaccacc
gcaccggccaacctggacaagatggtgctggcggatgaaagctggtgggaagagaaccgt
gccgagatgaccgaacggttcaatctctggctcctgatgtaa
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